RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 RASD2Q96D21 266 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 Q96M85 177 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ADAD1Q96M93 576 aaKnown RBP8.74□□□□□ -1.01
CCM2-204ENST00000470837 TIMP4Q99727 224 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ENKD1Q9H0I2 346 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SLC25A18Q9H1K4 315 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 OR51V1Q9H2C8 321 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 PRORYQ9H606 182 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 VCX3AQ9NNX9 186 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ZNF226Q9NYT6 803 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 DNAJC27Q9NZQ0 273 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 KLHL9Q9P2J3 617 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SEC14L4Q9UDX3 406 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SCOCQ9UIL1 159 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 ZNF346Q9UL40 294 aaKnown RBP8.74□□□□□ -1.01
CCM2-204ENST00000470837 ZMIZ1Q9ULJ6 1067 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 SNX5Q9Y5X3 404 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 LIPGQ9Y5X9 500 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 CPAMD8Q8IZJ3 1885 aa8.74□□□□□ -1.01
CCM2-204ENST00000470837 MED13Q9UHV7 2174 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CACNA1AO00555 2505 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CNTRLQ7Z7A1 2325 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 IGHV3-15A0A0B4J1V0 119 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 LOC102725191A0A1B0GVB3 256 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 A0A1B0GVC2 190 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 SLC22A31A6NKX4 558 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 E9PQ18 207 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 H0YC42 278 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 GPR171O14626 319 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 AHCYL1O43865 530 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 FZD7O75084 574 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 ENTPD6O75354 484 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 SLC2A10O95528 541 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 IGHG1P01857 330 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 IGHMP01871 453 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 LYNP07948 512 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 GUCA1AP43080 201 aaPredicted RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 SUCLG1P53597 346 aaKnown RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 BIDP55957 195 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CLRN1P58418 232 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 H3F3AP84243 136 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 RASGEF1BQ0VAM2 473 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 KLRB1Q12918 225 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 TMED1Q13445 227 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CRMP1Q14194 572 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 PON3Q15166 354 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 RNPS1Q15287 305 aaKnown RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 ZNF239Q16600 458 aaKnown RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 CTU2Q2VPK5 515 aaKnown RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 KCTD21Q4G0X4 260 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 KLHL22Q53GT1 634 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 TMEM201Q5SNT2 666 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 ARMC4Q5T2S8 1044 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 LSRQ86X29 649 aaPredicted RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 CCDC103Q8IW40 242 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CYB561A3Q8NBI2 242 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 SLC37A3Q8NCC5 494 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 OR2T4Q8NH00 348 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 FNDC8Q8TC99 324 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 FBLIM1Q8WUP2 373 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 ROBO4Q8WZ75 1007 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 ZNF566Q969W8 418 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 ADGRG7Q96K78 797 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 GPR137Q96N19 417 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 ZNF582Q96NG8 517 aaPredicted RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 TSPAN32Q96QS1 320 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 RBP7Q96R05 134 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 TAAR6Q96RI8 345 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 NMNAT3Q96T66 252 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 SRXN1Q9BYN0 137 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CCDC90BQ9GZT6 254 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 RERGLQ9H628 205 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 FANCFQ9NPI8 374 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 CHCHD3Q9NX63 227 aaKnown RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 KLHL13Q9P2N7 655 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 WARS2Q9UGM6 360 aaKnown RBP8.73□□□□□ -1.01
CCM2-204ENST00000470837 HEATR5AQ86XA9 2040 aa8.73□□□□□ -1.01
CCM2-204ENST00000470837 A0A087WXM4 84 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 A0A1B0GTH9 108 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 PRSS37A4D1T9 235 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 SLC22A20A6NK97 555 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 FAM183AA6NL82 134 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 CLCA1A8K7I4 914 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 AHRRA9YTQ3 701 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 ERVH48-1M5A8F1 160 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 SMAD9O15198 467 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 XPNPEP2O43895 674 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 WBP4O75554 376 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 FADS2O95864 444 aaKnown RBP8.72□□□□□ -1.01
CCM2-204ENST00000470837 HLA-DOBP13765 273 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 GABRB1P18505 474 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 CRABP1P29762 137 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 HTR1FP30939 366 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 PTGS2P35354 604 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 MTNR1AP48039 350 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 CENPAP49450 140 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 BLVRAP53004 296 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 NUDT6P53370 316 aa8.72□□□□□ -1.01
CCM2-204ENST00000470837 CLDN17P56750 224 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms