RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 C16orf74Q96GX8 76 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 S1PR3Q99500 378 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 PELOQ9BRX2 385 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ERVK-6Q9BXR3 956 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 PARD6BQ9BYG5 372 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 OPN3Q9H1Y3 402 aaPredicted RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 OR51V1Q9H2C8 321 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 KAT8Q9H7Z6 458 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 NTN4Q9HB63 628 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 LPAR2Q9HBW0 351 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 LHX3Q9UBR4 397 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ZMYM6O95789 1325 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 TTC21AQ8NDW8 1320 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CECR2Q9BXF3 1484 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SMCO2A6NFE2 343 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OR6C70A6NIJ9 312 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 GOLGA8JA6NMD2 632 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 GOLGA8KD6RF30 607 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 TEX46H3BTG2 121 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 H3BTX0 84 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 BTN3A3O00478 584 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OR10H3O60404 316 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 SCN2BO60939 215 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 NDUFS6O75380 124 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 HSPB1P04792 205 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 PNMA6AP0CW24 399 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 IDSP22304 550 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 STOMP27105 288 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 GTF2E2P29084 291 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CDH5P33151 784 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CYLC1P35663 651 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 GYG1P46976 350 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ARRB1P49407 418 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 RWDD2BP57060 319 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 UBE2G2P60604 165 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 GNB2P62879 340 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OGDHQ02218 1023 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 IRF8Q02556 426 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CHRNB3Q05901 458 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 PSG7Q13046 419 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 STX3Q13277 289 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ORC2Q13416 577 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ILKQ13418 452 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ZSWIM7Q19AV6 140 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF658BQ4V348 819 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CLVS2Q5SYC1 327 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 SLC22A10Q63ZE4 541 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 SLC8B1Q6J4K2 584 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CDC42EP5Q6NZY7 148 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ULK3Q6PHR2 472 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 FAM151BQ6UXP7 276 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 HSDL2Q6YN16 418 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 MOB2Q70IA6 237 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 P4HA3Q7Z4N8 544 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 AKAP14Q86UN6 197 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CLDN19Q8N6F1 224 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ALLCQ8N6M5 410 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 C14orf178Q8N769 122 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CCDC112Q8NEF3 446 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 STXBP6Q8NFX7 210 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OR10H4Q8NGA5 316 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OR4D6Q8NGJ1 314 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OR51G2Q8NGK0 314 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 OR9G4Q8NGQ1 327 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 WDR36Q8NI36 951 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 TMEM37Q8WXS4 190 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CACNG8Q8WXS5 425 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 RPL3LQ92901 407 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 MYLPFQ96A32 169 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 FAM131CQ96AQ9 280 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 BIRC7Q96CA5 298 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ECHDC3Q96DC8 303 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF514Q96K75 400 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CXorf58Q96LI9 332 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 DEFB118Q96PH6 123 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 TESK2Q96S53 571 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF184Q99676 751 aaPredicted RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 C7orf50Q9BRJ6 194 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 TMEM246Q9BRR3 403 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 MIEF1Q9NQG6 463 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 MS4A12Q9NXJ0 267 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 IL37Q9NZH6 218 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 ADA2Q9NZK5 511 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 CIDEBQ9UHD4 219 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 DCDC2Q9UHG0 476 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 MRTO4Q9UKD2 239 aaKnown RBP3.32□□□□□ -1.88
COL11A1-208ENST00000470170 RNF6Q9Y252 685 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 MROH7-TTC4A0A0A0MT08 1334 aa3.32□□□□□ -1.88
COL11A1-208ENST00000470170 FRMPD4Q14CM0 1322 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 OR5K4A6NMS3 321 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 E7ESA3 106 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 E7EWF7 191 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 TOR1AO14656 332 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CYTH3O43739 400 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 OR2J3O76001 311 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CLDN9O95484 217 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NUDT14O95848 222 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 EPOP01588 193 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms