RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PQLC2LA1A4F0 135 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 RNF222A6NCQ9 220 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 SLC22A31A6NKX4 558 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 ZNF705EA8MWA4 302 aaPredicted RBP7.28□□□□□ -1.24
TPM3-215ENST00000469717 PEX12O00623 359 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 TXNL1O43396 289 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 IL5P05113 134 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 HEXBP07686 556 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 GTF2F2P13984 249 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 TIMP2P16035 220 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 SLC2A5P22732 501 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 CST5P28325 142 aaPredicted RBP7.28□□□□□ -1.24
TPM3-215ENST00000469717 GDI1P31150 447 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 AP3S2P59780 193 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 TMEM44Q2T9K0 475 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 ASPGQ86U10 573 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 TMPRSS12Q86WS5 348 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 TMEM25Q86YD3 366 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 BEST3Q8N1M1 668 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 LNX2Q8N448 690 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 NUP43Q8NFH3 380 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 KXD1Q9BQD3 176 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 UCK1Q9HA47 277 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 MRPS30Q9NP92 439 aaKnown RBP7.28□□□□□ -1.24
TPM3-215ENST00000469717 DEC1Q9P2X7 70 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 CBY1Q9Y3M2 126 aa7.28□□□□□ -1.24
TPM3-215ENST00000469717 PAK4O96013 591 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 ANXA2P07355 339 aaKnown RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 TYRP14679 529 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TYRP1P17643 537 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 PTAFRP25105 342 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ATP1B3P54709 279 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 GMFBP60983 142 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 SGCAQ16586 387 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TMEM215Q68D42 235 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 POMZP3Q6PJE2 187 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 FRRS1Q6ZNA5 592 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 RHOUQ7L0Q8 258 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 SVBPQ8N300 66 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TRAM1L1Q8N609 369 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TIFAQ96CG3 184 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 MRPL48Q96GC5 212 aaKnown RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 CASD1Q96PB1 797 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 SLITRK2Q9H156 845 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 CAPN10Q9HC96 672 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 GHRLQ9UBU3 117 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 CCL26Q9Y258 94 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TRAV8-7A0A075B6U6 113 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 RFPL4AA6NLU0 287 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 RFPL4AL1F8VTS6 287 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 CACNB4O00305 520 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 ERI3O43414 337 aaKnown RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 RAD1O60671 282 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 LILRB5O75023 590 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ELFN1P0C7U0 828 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 MGMTP16455 207 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 CERS1P27544 350 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 NTSP30990 170 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 PPT1P50897 306 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 HTRA4P83105 476 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 ID2Q02363 134 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 SNTB1Q13884 538 aaKnown RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 NDUFAF6Q330K2 333 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 AMZ1Q400G9 498 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ZNF658BQ4V348 819 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 C9orf152Q5JTZ5 239 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 OR51A4Q8NGJ6 313 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 OR4A4PQ8NGN8 299 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 OR1J2Q8NGS2 313 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 OR6K6Q8NGW6 343 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 NUBPLQ8TB37 319 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TMEM239Q8WW34 195 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 RELTQ969Z4 430 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 BPIFA2Q96DR5 249 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 Q96M85 177 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 RSRP1Q9BUV0 290 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ULBP3Q9BZM4 244 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TREM1Q9NP99 234 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 SLC23A2Q9UGH3 650 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ZNF223Q9UK11 482 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 SIGLEC7Q9Y286 467 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ZNF443Q9Y2A4 671 aaPredicted RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 V9GY05 133 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 FAM186AA6NE01 2351 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 FAM86C2PA6NEL3 165 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 NAP1L6A6NFF2 107 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 OR5H14A6NHG9 310 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ACOT7O00154 380 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 EIF1BO60739 113 aaKnown RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 AIFM1O95831 613 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 RHOP08100 348 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 ADH6P28332 368 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 EIF1P41567 113 aaKnown RBP7.27□□□□□ -1.25
TPM3-215ENST00000469717 NR0B2Q15466 257 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 TCTN1Q2MV58 587 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 AVPI1Q5T686 147 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 OR4C11Q6IEV9 310 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 DPPA4Q7L190 304 aa7.27□□□□□ -1.25
TPM3-215ENST00000469717 SLC29A4Q7RTT9 530 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms