RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KLHL28Q9NXS3 571 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 RPS6KB2Q9UBS0 482 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 MCTS1Q9ULC4 181 aaKnown RBP5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ANGPT4Q9Y264 503 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 IFT52Q9Y366 437 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 CAPN7Q9Y6W3 813 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 ZZEF1O43149 2961 aa5.59□□□□□ -1.51
PTCD3-208ENST00000469585 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.52
PTCD3-208ENST00000469585 ZFYVE26Q68DK2 2539 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 MGAQ8IWI9 3026 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CELSR3Q9NYQ7 3312 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CFAP47Q6ZTR5 3102 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 A0A096LPI6 279 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ANKRD28O15084 1053 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 SLC22A2O15244 555 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF264O43296 627 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GMFGO60234 142 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 EIF4E2O60573 245 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TSPAN2O60636 221 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TRIM3O75382 744 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 DCTN3O75935 186 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GLSO94925 669 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 PSMG1O95456 288 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 OXSR1O95747 527 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 NPPAP01160 153 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 IGHG3P01860 377 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CLPSP04118 112 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 HPNP05981 417 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 DBIP07108 87 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ZCCHC18P0CG32 403 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 OR12D1P0DN82 309 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ACP2P11117 423 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 EDN2P20800 178 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 AGAP20933 346 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CHMP24386 653 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GTF2E2P29084 291 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 UQCRFS1P47985 274 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CCR9P51686 369 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 MNAT1P51948 309 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GNGT1P63211 74 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 SRYQ05066 204 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CAPRIN1Q14444 709 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TAF11Q15544 211 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GLYR1Q49A26 553 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 LIN52Q52LA3 116 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CMPK2Q5EBM0 449 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GCNT6Q5T4J0 391 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 C1orf185Q5T7R7 199 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 SAXO2Q658L1 398 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 OR5M10Q6IEU7 315 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 OR2A2Q6IF42 318 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 NPSR1Q6W5P4 371 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 C1orf122Q6ZSJ8 110 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 RRM2BQ7LG56 351 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 SPATA21Q7Z572 469 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ARPINQ7Z6K5 226 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 MARCH3Q86UD3 253 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 GRAMD2AQ8IUY3 354 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 LACC1Q8IV20 430 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF619Q8N2I2 560 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TEX45Q8NA69 505 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 FAM83FQ8NEG4 500 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 MIPOL1Q8TD10 442 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 DUSP19Q8WTR2 217 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 PHF10Q8WUB8 498 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 RASSF5Q8WWW0 418 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 SMPDL3BQ92485 455 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 HDAC2Q92769 488 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 HGDQ93099 445 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ROPN1LQ96C74 230 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CMTM5Q96DZ9 223 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 SH3YL1Q96HL8 342 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 KLHL15Q96M94 604 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ZFP3Q96NJ6 502 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 OR52B2Q96RD2 323 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 NODALQ96S42 347 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 BARD1Q99728 777 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 ECSITQ9BQ95 431 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 POLDIP3Q9BY77 421 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 DSN1Q9H410 356 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 EVA1AQ9H8M9 152 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 MTHFD2LQ9H903 347 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TPT1P8Q9HAU6 139 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 NDE1Q9NXR1 346 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TINAGQ9UJW2 476 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 PRDM4Q9UKN5 801 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 RPH3AQ9Y2J0 694 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 MRPS18CQ9Y3D5 142 aaKnown RBP5.58□□□□□ -1.52
PTCD3-208ENST00000469585 L3MBTL1Q9Y468 752 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 CHD6Q8TD26 2715 aa5.58□□□□□ -1.52
PTCD3-208ENST00000469585 TLN1Q9Y490 2541 aaKnown RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 RP1L1Q8IWN7 2480 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 A0A0G2JPF8 293 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 A0A1W2PP18 115 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 GMNCA6NCL1 334 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 HNRNPCL2B2RXH8 293 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 HNRNPCL3B7ZW38 293 aa5.57□□□□□ -1.52
PTCD3-208ENST00000469585 HNRNPCL1O60812 293 aaKnown RBP5.57□□□□□ -1.52
PTCD3-208ENST00000469585 H6PDO95479 791 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms