RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 MS4A18Q3C1V0 323 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 TIMM23BQ5SRD1 257 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 HMBOX1Q6NT76 420 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 NIPAL3Q6P499 406 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 CYP2R1Q6VVX0 501 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 TMPRSS11FQ6ZWK6 438 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 BHLHA15Q7RTS1 189 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-208ENST00000469123 SLC46A3Q7Z3Q1 461 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 OAFQ86UD1 273 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 CXorf67Q86X51 503 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-208ENST00000469123 EPHX4Q8IUS5 362 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 P3H2Q8IVL5 708 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 NRMQ8IXM6 262 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 CCDC36Q8IYA8 594 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 ZIC4Q8N9L1 334 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 OR6X1Q8NH79 312 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 PFN4Q8NHR9 129 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 SLC7A13Q8TCU3 470 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 ZNF385AQ96PM9 386 aaKnown RBP7.56□□□□□ -1.2
SSBP1-208ENST00000469123 INIPQ9NRY2 104 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 TMCC3Q9ULS5 477 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 PRR14LQ5THK1 2151 aa7.56□□□□□ -1.2
SSBP1-208ENST00000469123 HEATR1Q9H583 2144 aaKnown RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 CADP27708 2225 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 NAV2Q8IVL1 2488 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 ROS1P08922 2347 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 ABCA12Q86UK0 2595 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 A0A087WUU8 490 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 TCRBV5S2A0A599 114 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 DHRS12A0PJE2 317 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 CIB4A0PJX0 185 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 FAM221AA4D161 298 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 EFCAB9A8MZ26 197 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 MCIDASD6RGH6 385 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 BLOC1S5-TXNDC5H3BN57 136 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 hCG_2039718K7EN88 272 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 GSC2O15499 205 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 BCL10O95999 233 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 WNT11O96014 354 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 IGHG1P01857 330 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 IGHV1-2P23083 117 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 COL8A1P27658 744 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 RRM2P31350 389 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 MSX2P35548 267 aaPredicted RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 HMGA2P52926 109 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 RPS4XP62701 263 aaKnown RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 MS4A2Q01362 244 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 TLE4Q04727 773 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 RPL18Q07020 188 aaKnown RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 FAPQ12884 760 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 IQCCQ4KMZ1 466 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 BEX5Q5H9J7 111 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 FGD3Q5JSP0 725 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 ZNF787Q6DD87 383 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 PODNL1Q6PEZ8 512 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 KLHL24Q6TFL4 600 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 SLC35D2Q76EJ3 337 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 TSEN54Q7Z6J9 526 aaKnown RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 C10orf67Q8IYJ2 551 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 GPR137CQ8N3F9 429 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 ZNF433Q8N7K0 673 aaPredicted RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 FAM86B1Q8N7N1 296 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 OR4K5Q8NGD3 323 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 MAGEE2Q8TD90 523 aaPredicted RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 ZNF775Q96BV0 537 aaPredicted RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 SLC25A44Q96H78 314 aaPredicted RBP7.55□□□□□ -1.2
SSBP1-208ENST00000469123 WFIKKN1Q96NZ8 548 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 OR2M2Q96R28 347 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 ARPC5LQ9BPX5 153 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 C20orf141Q9NUB4 165 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 TAS2R5Q9NYW4 299 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 RHCGQ9UBD6 479 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 PRSS50Q9UI38 385 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 AURKCQ9UQB9 309 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 AMDHD2Q9Y303 409 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 V9GYQ6 96 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 PLCE1Q9P212 2302 aa7.55□□□□□ -1.2
SSBP1-208ENST00000469123 TCRBV3S1A0A5B6 114 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 SH3PXD2BA1X283 911 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 ARRDC5A6NEK1 342 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 A6NIZ1 184 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 OR5H1A6NKK0 313 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 C11orf98E9PRG8 122 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 CLOCKO15516 846 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 AHCYL1O43865 530 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 CIB2O75838 187 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 IGHMP01871 453 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 ITGA5P08648 1049 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 CBLP22681 906 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 FPR3P25089 353 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 DNAJA1P31689 397 aaKnown RBP7.54□□□□□ -1.2
SSBP1-208ENST00000469123 OMPP47874 163 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 SELENOPP49908 381 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 RAP1BP61224 184 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 RAP1AP62834 184 aa7.54□□□□□ -1.2
SSBP1-208ENST00000469123 FOXD4Q12950 439 aaPredicted RBP7.54□□□□□ -1.2
SSBP1-208ENST00000469123 C3orf36Q3SXR2 165 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms