RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RGCCQ9H4X1 137 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM185BQ9H7F4 350 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 IPPKQ9H8X2 491 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 NMNAT1Q9HAN9 279 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CHST11Q9NPF2 352 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF302Q9NR11 478 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PARP11Q9NR21 331 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 GLRX2Q9NS18 164 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ASF1BQ9NVP2 202 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 BTG4Q9NY30 223 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TRPC4Q9UBN4 977 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 LPAR3Q9UBY5 353 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 KCNE5Q9UJ90 142 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SRPK3Q9UPE1 567 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RASD1Q9Y272 281 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 FAM96BQ9Y3D0 163 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OARD1Q9Y530 152 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 BTAF1O14981 1849 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PATJQ8NI35 1801 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PDCD11Q14690 1871 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 WDR81Q562E7 1941 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 MTCL1Q9Y4B5 1905 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TEX13DA0A0J9YY54 714 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 A0A1B0GW64 132 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TVP23AA6NH52 213 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR5H14A6NHG9 310 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 GABRR3A8MPY1 467 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 B4DEV8 164 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PPP5D1E7EU14 171 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 NPIPA2E9PIF3 369 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SYT5O00445 386 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CYR61O00622 381 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TP53I11O14683 189 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OGG1O15527 345 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 P2RX6O15547 441 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FLRT2O43155 660 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TLX2O43763 284 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 LANCL1O43813 399 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 DOK2O60496 412 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 DIRAS1O95057 198 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 GASTP01350 101 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 MT-ND4P03905 459 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CD74P04233 296 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 H1F0P07305 194 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ASGR1P07306 291 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CHRM4P08173 479 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 GUSBP08236 651 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CD14P08571 375 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ALPIP09923 528 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 UCHL1P09936 223 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 LIMS3P0CW19 117 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 LIMS4P0CW20 117 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ETFAP13804 333 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ADCYAP1P18509 176 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CELP19835 753 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SLC2A5P22732 501 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 DGKAP23743 735 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 HTR1FP30939 366 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 APOBEC3AP31941 199 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 THBS2P35442 1172 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 THBS4P35443 961 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ARR3P36575 388 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 MAP3K8P41279 467 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SLC6A9P48067 706 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CXCR3P49682 368 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 GNG10P50151 68 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 AFF3P51826 1226 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 LUMP51884 338 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PNLIPRP2P54317 469 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ARF6P62330 175 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ACTC1P68032 377 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ACTA1P68133 377 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SCARB2Q14108 478 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ABRAXAS2Q15018 415 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 JOSD1Q15040 202 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TARBP2Q15633 366 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SYPL1Q16563 259 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FAM110CQ1W6H9 321 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM241Q24JQ0 296 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SOWAHAQ2M3V2 549 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ALG11Q2TAA5 492 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FBXO47Q5MNV8 452 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZDHHC20Q5W0Z9 365 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF529Q6P280 563 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM71Q6P5X7 295 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SMARCD3Q6STE5 483 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PAQR3Q6TCH7 311 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF322Q6U7Q0 402 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 APOOLQ6UXV4 268 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 Q6ZTK2 550 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SLC36A1Q7Z2H8 476 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 LRRC70Q7Z2Q7 622 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 GALNTL5Q7Z4T8 443 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TECPR1Q7Z6L1 1165 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PPP1R3BQ86XI6 285 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF573Q86YE8 665 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CPOQ8IVL8 374 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CDK20Q8IZL9 346 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms