RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SLC9A3P48764 834 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF91Q05481 1191 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CLN3Q13286 438 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 SNAPC1Q16533 368 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 SEZ6L2Q6UXD5 910 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CASP12Q6UXS9 341 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 NHLRC1Q6VVB1 395 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CCDC36Q8IYA8 594 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 ZPLD1Q8TCW7 415 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 SIGLEC12Q96PQ1 595 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 GPN2Q9H9Y4 310 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-208ENST00000468300 ACOT13Q9NPJ3 140 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CMC2Q9NRP2 79 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 GRHPRQ9UBQ7 328 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 KNTC1P50748 2209 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 FAM183AA6NL82 134 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RCBTB2O95199 551 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 NUDT14O95848 222 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 PLGP00747 810 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SHC1P29353 583 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CD96P40200 585 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 FOXO1Q12778 655 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 MADCAM1Q13477 382 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 ZMYND11Q15326 602 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TM4SF20Q53R12 229 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SLC35F1Q5T1Q4 408 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RPL13AP3Q6NVV1 102 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 JMJD6Q6NYC1 403 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RTL4Q6ZR62 310 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RAB43Q86YS6 212 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CDK20Q8IZL9 346 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 OR5M1Q8NGP8 315 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TMEM41AQ96HV5 264 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 DACH2Q96NX9 599 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 GNRHR2Q96P88 292 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TIMP4Q99727 224 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 DHRS9Q9BPW9 319 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 COPS4Q9BT78 406 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 MED20Q9H944 212 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CNOT2Q9NZN8 540 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF229Q9UJW7 825 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 POLHQ9Y253 713 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TPRKBQ9Y3C4 175 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 KIAA1549Q9HCM3 1950 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RIF1Q5UIP0 2472 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TRAV36DV7A0A075B6V5 113 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 A8MVM7 634 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 LINC01387J3KSC0 135 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TP53I11O14683 189 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 NKX2-8O15522 239 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 MRPS14O60783 128 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 HIST1H1CP16403 213 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 EEF1B2P24534 225 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CXCR1P25024 350 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 AQP2P41181 271 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 P2RY4P51582 365 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 B3GALT5-AS1P59052 145 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SCRN3Q0VDG4 424 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 ST3GAL4Q11206 333 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RSPO4Q2I0M5 234 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 C1orf140Q5VVS0 124 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SLC22A10Q63ZE4 541 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 PLCZ1Q86YW0 608 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 STK35Q8TDR2 534 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CDCA4Q9BXL8 241 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 WDR12Q9GZL7 423 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 NAA50Q9GZZ1 169 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 FKRPQ9H9S5 495 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CLN6Q9NWW5 311 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 LSM2Q9Y333 95 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CEP250Q9BV73 2442 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 A0A1W2PPH5 198 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF208O43345 1280 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RGS10O43665 173 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 NDUFB2O95178 105 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 F10P00742 488 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RFPL3SP0C7P2 107 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 PEPDP12955 493 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 GSTT1P30711 240 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 APOBEC1P41238 236 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SOX8P57073 446 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 RPL18Q07020 188 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 AIMP2Q13155 320 aaKnown RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 NEDD8Q15843 81 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SPINK14Q6IE38 97 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CPOQ8IVL8 374 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-208ENST00000468300 NPEPL1Q8NDH3 523 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 LGALS12Q96DT0 336 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 MRGPRX4Q96LA9 322 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 IFT27Q9BW83 186 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 TEX12Q9BXU0 123 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CYB5R1Q9UHQ9 305 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 KLK13Q9UKR3 277 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 CACNG2Q9Y698 323 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 AHCTF1Q8WYP5 2266 aa7.44□□□□□ -1.22
BRCA1-208ENST00000468300 MS4A18H0YCH9 400 aa7.43□□□□□ -1.22
BRCA1-208ENST00000468300 M0R082 166 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms