RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 VTCN1Q7Z7D3 282 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 DTX2Q86UW9 622 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 UEVLDQ8IX04 471 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 SCAIQ8N9R8 606 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 OR5J2Q8NH18 312 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 HIST1H2ACQ93077 130 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 C1QTNF6Q9BXI9 259 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 MRPL39Q9NYK5 338 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 CISD1Q9NZ45 108 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 ABCD2Q9UBJ2 740 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 EGFL7Q9UHF1 273 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 CADP27708 2225 aa12.33□□□□□ -0.44
CCHCR1-211ENST00000467553 LOC102725191A0A1B0GVB3 256 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 DPRXA6NFQ7 191 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 INAFM1C9JVW0 142 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF587BE7ETH6 402 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 PDLIM1O00151 329 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 PLPP3O14495 311 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 FZD7O75084 574 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC43A1O75387 559 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 GMNNO75496 209 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 UPK3AO75631 287 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 OR5F1O95221 314 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 MT-ATP6P00846 226 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 SERPINA1P01009 418 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 SOD3P08294 240 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 TCN1P20061 433 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 IFNA8P32881 189 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC25A3Q00325 362 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF74Q16587 644 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 GKAP1Q5VSY0 366 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 CARD17Q5XLA6 110 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 GLYATQ6IB77 296 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 KLHL17Q6TDP4 642 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 SEZ6L2Q6UXD5 910 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 TMEM108Q6UXF1 575 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 CBLL1Q75N03 491 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 PRIMA1Q86XR5 153 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 LRRC17Q8N6Y2 441 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 ADPRHL1Q8NDY3 354 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 TXNDC15Q96J42 360 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 TRAF4Q9BUZ4 470 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 EMC6Q9BV81 110 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 AMBRA1Q9C0C7 1298 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 POLR2J2Q9GZM3 115 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 POLR2J3Q9H1A7 115 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 SPAG4Q9NPE6 437 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 NANSQ9NR45 359 aa12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 MAGED1Q9Y5V3 778 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-211ENST00000467553 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF726A6NNF4 738 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 TLX2O43763 284 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 AKAP8O43823 692 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 CRLF1O75462 422 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF432O94892 652 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 TP53P04637 393 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 IFNW1P05000 195 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 PAX7P23759 505 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 PTAFRP25105 342 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 ZNF83P51522 516 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 UGT2B15P54855 530 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 DSCR9P59020 149 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 PUDPQ08623 228 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 ST3GAL3Q11203 375 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 PGGHGQ32M88 737 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 IFI44LQ53G44 452 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 AGAP6Q5VW22 663 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 HMBOX1Q6NT76 420 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 DNM1P46Q6ZS02 220 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 DEPDC4Q8N2C3 294 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 GPR137CQ8N3F9 429 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 WDR31Q8NA23 367 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 FAM156AQ8NDB6 213 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 TMEM239Q8WW34 195 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 ADAD1Q96M93 576 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 CDRT15Q96T59 188 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 REG4Q9BYZ8 158 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC19A3Q9BZV2 496 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 MEPEQ9NQ76 525 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC17A5Q9NRA2 495 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 MED29Q9NX70 200 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 RHCGQ9UBD6 479 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 A4GNTQ9UNA3 340 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 SNX13Q9Y5W8 968 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC25A15Q9Y619 301 aa12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-211ENST00000467553 ALPK2Q86TB3 2170 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 SLC35F4A4IF30 521 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 SHISA9B4DS77 424 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 BLOC1S5-TXNDC5H3BN57 136 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 J3KTA2 159 aa12.3□□□□□ -0.44
CCHCR1-211ENST00000467553 M0R3G1 203 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms