RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SLC25A15Q9Y619 301 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 TP53BP1Q12888 1972 aaPredicted RBP3□□□□□ -1.93
CDC42BPA-211ENST00000466538 CHD4Q14839 1912 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZNF646O15015 1829 aaPredicted RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 CTAGE15A4D2H0 777 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 TRIM49D1C9J1S8 452 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 C12orf77C9JDV5 145 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 DLGAP1O14490 977 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 NPIPB7O75200 414 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 AGTP01019 485 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 SERPIND1P05546 499 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 CRISP2P16562 243 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 NUDT1P36639 197 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 NPBWR2P48146 333 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 PSG7Q13046 419 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 PDIA2Q13087 525 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 DAZ2Q13117 558 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 KRT71Q3SY84 523 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 VPS26BQ4G0F5 336 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 PAGE3Q5JUK9 113 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 ARMC12Q5T9G4 340 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 CTAGE6Q86UF2 777 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 MFSD6LQ8IWD5 586 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 BBS5Q8N3I7 341 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 SDR9C7Q8NEX9 313 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 RAB3IL1Q8TBN0 382 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 NDRG1Q92597 394 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 ARPC1AQ92747 370 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 MYDGFQ969H8 173 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 RPUSD4Q96CM3 377 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZIM3Q96PE6 472 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 RASL11BQ9BPW5 248 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 GPR61Q9BZJ8 451 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 DEFB127Q9H1M4 99 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 ADAP2Q9NPF8 381 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 DAZ3Q9NR90 486 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 PSMC3IPQ9P2W1 217 aaPredicted RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 RPS6KB2Q9UBS0 482 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 NUFIP1Q9UHK0 495 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 CELA1Q9UNI1 258 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZNF318Q5VUA4 2279 aa2.99□□□□□ -1.93
CDC42BPA-211ENST00000466538 IGLV3-22A0A075B6J6 115 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 A0A1B0GUA9 196 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 H0Y9J4 135 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 CHMLP26374 656 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 CTRLP40313 264 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 GPR6P46095 362 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 CSNK1DP48730 415 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 SH3BGRP55822 239 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 MRPS22P82650 360 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 BEX3Q00994 111 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 TGFBIQ15582 683 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 XKR7Q5GH72 579 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 RAET1LQ5VY80 246 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 CTRB2Q6GPI1 263 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 CCDC73Q6ZRK6 1079 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 H2AFVQ71UI9 128 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 RALGPS2Q86X27 583 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZNF557Q8N988 423 aaPredicted RBP2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR7G2Q8NG99 324 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR4C5Q8NGB2 326 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR2G3Q8NGZ4 309 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR2G2Q8NGZ5 317 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR6X1Q8NH79 312 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 MCOLN3Q8TDD5 553 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 RNF138Q8WVD3 245 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 CENPKQ9BS16 269 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 NUP58Q9BVL2 599 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 TMEM59Q9BXS4 323 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 SRMSQ9H3Y6 488 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 EML4Q9HC35 981 aaKnown RBP2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 ANAPC11Q9NYG5 84 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 STARD10Q9Y365 291 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 USP47Q96K76 1375 aa2.98□□□□□ -1.93
CDC42BPA-211ENST00000466538 RBMY1BA6NDE4 496 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 RBMY1EA6NEQ0 496 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 ERLIN1O75477 346 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 KLF8O95600 359 aaPredicted RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 IGHV4-34P06331 123 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 RBMY1DP0C7P1 496 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 RBMY1A1P0DJD3 496 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 ATP5C1P36542 298 aaKnown RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 TNNT2P45379 298 aaPredicted RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 PRMT2P55345 433 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZNF630Q2M218 657 aaPredicted RBP2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 CARD17Q5XLA6 110 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 FRMPD2BQ6IN97 320 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 C6orf89Q6UWU4 347 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 LHFPL3Q86UP9 236 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 TTC5Q8N0Z6 440 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 RNF175Q8N4F7 328 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 FAM71E2Q8N5Q1 922 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 PLPPR1Q8TBJ4 325 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 FANK1Q8TC84 345 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 CYYR1Q96J86 154 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 SH3GL3Q99963 347 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 ECSITQ9BQ95 431 aa2.97□□□□□ -1.93
CDC42BPA-211ENST00000466538 CCL28Q9NRJ3 127 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms