RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 CD38P28907 300 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 MAZP56270 477 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 PPP3R1P63098 170 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ACTC1P68032 377 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ACTA1P68133 377 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 FABP5Q01469 135 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 STX4Q12846 297 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 HNRNPA0Q13151 305 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 ASAH1Q13510 395 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 C1orf61Q13536 156 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 TDGQ13569 410 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 DNASE1L3Q13609 305 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 FHL1Q13642 323 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 GGTLC2Q14390 218 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ZNF79Q15937 498 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ZNF362Q5T0B9 420 aaPredicted RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 C22orf42Q6IC83 251 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ULK3Q6PHR2 472 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 NPSR1Q6W5P4 371 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 RTL4Q6ZR62 310 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 MEX3DQ86XN8 651 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 SIRT6Q8N6T7 355 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ZNF615Q8N8J6 731 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ZBTB8BQ8NAP8 495 aaPredicted RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 BEND2Q8NDZ0 799 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 FAM83FQ8NEG4 500 aaPredicted RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 BBS1Q8NFJ9 593 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 OR4F15Q8NGB8 312 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 PFN4Q8NHR9 129 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 SPRYD4Q8WW59 207 aaPredicted RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 LIPHQ8WWY8 451 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 ACOT12Q8WYK0 555 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 RBM18Q96H35 190 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 OR1F2PQ96R84 312 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 GPX7Q96SL4 187 aaPredicted RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 SECISBP2Q96T21 854 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 TIMP4Q99727 224 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 MAP3K3Q99759 626 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 KCNS3Q9BQ31 491 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 AIFM2Q9BRQ8 373 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 KATNB1Q9BVA0 655 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 HOXD1Q9GZZ0 328 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 KCNN2Q9H2S1 579 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 MIXL1Q9H2W2 232 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 SNTG1Q9NSN8 517 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 C20orf141Q9NUB4 165 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 IL20RAQ9UHF4 553 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 KLHL21Q9UJP4 597 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 TBC1D24Q9ULP9 559 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 NDRG2Q9UN36 371 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 MRPS17Q9Y2R5 130 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 CSNK1G3Q9Y6M4 447 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 SCN2AQ99250 2005 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 TDRD6O60522 2096 aaKnown RBP7.5□□□□□ -1.21
LSG1-206ENST00000466391 THADAQ6YHU6 1953 aa7.5□□□□□ -1.21
LSG1-206ENST00000466391 A0A087WUJ7 227 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 IGKV3D-11A0A0A0MRZ8 115 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 NPIPA5A0A0B4J1W7 369 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 SERINC4A6NH21 518 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 NPIPA7E9PJI5 369 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 H3BMH7 237 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 GTPBP1O00178 669 aaKnown RBP7.49□□□□□ -1.21
LSG1-206ENST00000466391 GABRPO00591 440 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 ARPC3O15145 178 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 PLPP2O43688 288 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 SLC2A10O95528 541 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 CH25HO95992 272 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 MT-ND5P03915 603 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 CLPSP04118 112 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 TRAPPC2P0DI81 140 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 TRAPPC2BP0DI82 140 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 NPIPA8P0DM63 369 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 CT45A8P0DMV1 189 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 CT45A9P0DMV2 189 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 APEHP13798 732 aaKnown RBP7.49□□□□□ -1.21
LSG1-206ENST00000466391 ZNF3P17036 446 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 F8A1P23610 371 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 GTF2E2P29084 291 aaKnown RBP7.49□□□□□ -1.21
LSG1-206ENST00000466391 SDC2P34741 201 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 LOXL3P58215 753 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 NXPH1P58417 271 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 HNRNPKP61978 463 aaKnown RBP eCLIP7.49□□□□□ -1.21
LSG1-206ENST00000466391 RPS4XP62701 263 aaKnown RBP7.49□□□□□ -1.21
LSG1-206ENST00000466391 BLOC1S1P78537 153 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 DEFB110Q30KQ9 67 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 KLHL26Q53HC5 615 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 CT45A2Q5DJT8 189 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 ZNF542PQ5EBM4 170 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 ALG10BQ5I7T1 473 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 PLBD1Q6P4A8 553 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 GDPD3Q7L5L3 318 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 LHFPL3Q86UP9 236 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 SYS1Q8N2H4 156 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 TEX19Q8NA77 164 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 POMGNT2Q8NAT1 580 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 SLC37A3Q8NCC5 494 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 ATP6V1C2Q8NEY4 427 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 OR13C2Q8NGS9 318 aa7.49□□□□□ -1.21
LSG1-206ENST00000466391 PTP4A1Q93096 173 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms