RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 FAM46AQ96IP4 442 aaKnown RBP17.91■□□□□ 0.46
PTCD3-206ENST00000465560 ALPK1Q96QP1 1244 aa17.91■□□□□ 0.46
PTCD3-206ENST00000465560 OR2M2Q96R28 347 aa17.91■□□□□ 0.46
PTCD3-206ENST00000465560 LINC00470Q9BZP3 86 aa17.91■□□□□ 0.46
PTCD3-206ENST00000465560 ACTR6Q9GZN1 396 aa17.91■□□□□ 0.46
PTCD3-206ENST00000465560 MED29Q9NX70 200 aa17.91■□□□□ 0.46
PTCD3-206ENST00000465560 LYVE1Q9Y5Y7 322 aa17.91■□□□□ 0.46
PTCD3-206ENST00000465560 PRR14LQ5THK1 2151 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 CDC42EP2O14613 210 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 SLC43A1O75387 559 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 LYZL6O75951 148 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 IFNGR1P15260 489 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 PPP3CBP16298 524 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 IL32P24001 234 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 LIMS1P48059 325 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 HMGA2P52926 109 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 ANKDD1AQ495B1 522 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 OR2T5Q6IEZ7 315 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 OAFQ86UD1 273 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 TMEM123Q8N131 208 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 STEAP2Q8NFT2 490 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 OR13C2Q8NGS9 318 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 OR2T29Q8NH02 315 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 TXNDC15Q96J42 360 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 CHID1Q9BWS9 393 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 TAS2R16Q9NYV7 291 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 TMCC3Q9ULS5 477 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 SETXQ7Z333 2677 aaKnown RBP17.9■□□□□ 0.46
PTCD3-206ENST00000465560 CACNA1DQ01668 2161 aa17.9■□□□□ 0.46
PTCD3-206ENST00000465560 TRAV27A0A087WT01 109 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 SLC35F4A4IF30 521 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 TNFRSF11BO00300 401 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 F13BP05160 661 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 ITGA5P08648 1049 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 EPXP11678 715 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 DNAJA1P31689 397 aaKnown RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 FHL1Q13642 323 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 TSC22D1Q15714 1073 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 C1orf146Q5VVC0 180 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 SLC35D2Q76EJ3 337 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 BHLHA15Q7RTS1 189 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 ABHD12BQ7Z5M8 362 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF295-AS1Q8N0V1 137 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF433Q8N7K0 673 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 MOSPD2Q8NHP6 518 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 C14orf79Q96F83 325 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 ADAD1Q96M93 576 aaKnown RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 WFIKKN1Q96NZ8 548 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 ALKBH3Q96Q83 286 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 USB1Q9BQ65 265 aaKnown RBP17.89■□□□□ 0.45
PTCD3-206ENST00000465560 MED18Q9BUE0 208 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 EMC6Q9BV81 110 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 INIPQ9NRY2 104 aa17.89■□□□□ 0.45
PTCD3-206ENST00000465560 A0A1W2PRG6 482 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 NPIPB13A6NJU9 1138 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 NPIPB4C9JG80 1138 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 CLOCKO15516 846 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 KLF4O43474 513 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 UPK3AO75631 287 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 KRT33AO76009 404 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 MPGP29372 298 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 FOXG1P55316 489 aaPredicted RBP17.88■□□□□ 0.45
PTCD3-206ENST00000465560 BIDP55957 195 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 LGALS3BPQ08380 585 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 LAPTM4AQ15012 233 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 ALG10Q5BKT4 473 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 ANKRD34AQ69YU3 496 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 OR4C15Q8NGM1 316 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 OR51A7Q8NH64 312 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 OR6X1Q8NH79 312 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 UTP4Q969X6 686 aaKnown RBP17.88■□□□□ 0.45
PTCD3-206ENST00000465560 S100PBPQ96BU1 408 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 REEP1Q9H902 201 aa17.88■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF726A6NNF4 738 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF587BE7ETH6 402 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 OR10H3O60404 316 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 CIB2O75838 187 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 BCL10O95999 233 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 IFNGR2P38484 337 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 ERFP50548 548 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 DAP3P51398 398 aaKnown RBP17.87■□□□□ 0.45
PTCD3-206ENST00000465560 PRPS1P60891 318 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 CAMK2DQ13557 499 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 MELKQ14680 651 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 ZBED5Q49AG3 693 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 C22orf34Q6ZV56 151 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 LINGO2Q7L985 606 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 ZER1Q7Z7L7 766 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 WDFY1Q8IWB7 410 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 C20orf196Q8IYI0 205 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 LINC00471Q8N535 108 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 LRRC75AQ8NAA5 344 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 PAPD5Q8NDF8 572 aaKnown RBP17.87■□□□□ 0.45
PTCD3-206ENST00000465560 SLCO4A1Q96BD0 722 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 RSRC1Q96IZ7 334 aaKnown RBP17.87■□□□□ 0.45
PTCD3-206ENST00000465560 LRR1Q96L50 414 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 TNFRSF13CQ96RJ3 184 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 YY1AP1Q9H869 796 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 CCM2LQ9NUG4 571 aaPredicted RBP17.87■□□□□ 0.45
PTCD3-206ENST00000465560 VNN3Q9NY84 501 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms