RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 HIST1H2ACQ93077 130 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 BOD1Q96IK1 185 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 TXNDC15Q96J42 360 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 LRGUKQ96M69 825 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 USB1Q9BQ65 265 aaKnown RBP17.9■□□□□ 0.46
SKA3-205ENST00000465471 MED18Q9BUE0 208 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 MCCC2Q9HCC0 563 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 MED29Q9NX70 200 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 SH3PXD2BA1X283 911 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 C11orf98E9PRG8 122 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 CDC42EP2O14613 210 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 SLC43A1O75387 559 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 UPK3AO75631 287 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 GADD45GO95257 159 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 STAMBPO95630 424 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 CRYGSP22914 178 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 IL32P24001 234 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 MPGP29372 298 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 RRM2P31350 389 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 SLC9A3P48764 834 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 FLOT2Q14254 428 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 FAM98BQ52LJ0 330 aaKnown RBP17.89■□□□□ 0.45
SKA3-205ENST00000465471 LINGO2Q7L985 606 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 OR4K5Q8NGD3 323 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 MMADHCQ9H3L0 296 aaPredicted RBP17.89■□□□□ 0.45
SKA3-205ENST00000465471 UPB1Q9UBR1 384 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 TMEM5Q9Y2B1 443 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 PRR14LQ5THK1 2151 aa17.89■□□□□ 0.45
SKA3-205ENST00000465471 TACC2O95359 2948 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 SLC35F4A4IF30 521 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 NPIPB13A6NJU9 1138 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 NPIPB4C9JG80 1138 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 BLOC1S5-TXNDC5H3BN57 136 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 RPL36A-HNRNPH2H7BZ11 118 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 SIAH2O43255 324 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 KLF4O43474 513 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 RNF13O43567 381 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 CTAG2O75638 210 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 RAP2AP10114 183 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 IFNGR1P15260 489 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 DNAJA1P31689 397 aaKnown RBP17.88■□□□□ 0.45
SKA3-205ENST00000465471 AQP2P41181 271 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 OMPP47874 163 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 HMGA2P52926 109 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 CBX1P83916 185 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 CHRNB3Q05901 458 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 ANKDD1AQ495B1 522 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 SEZ6L2Q6UXD5 910 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 SLC35D2Q76EJ3 337 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 ASRGL1Q7L266 308 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 ABHD12BQ7Z5M8 362 aaPredicted RBP17.88■□□□□ 0.45
SKA3-205ENST00000465471 MEX3DQ86XN8 651 aaKnown RBP17.88■□□□□ 0.45
SKA3-205ENST00000465471 C1orf162Q8NEQ5 155 aaPredicted RBP17.88■□□□□ 0.45
SKA3-205ENST00000465471 OR52J3Q8NH60 311 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 OR6X1Q8NH79 312 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 MOSPD2Q8NHP6 518 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 LRR1Q96L50 414 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 ALKBH3Q96Q83 286 aaPredicted RBP17.88■□□□□ 0.45
SKA3-205ENST00000465471 EMC6Q9BV81 110 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 ZNF226Q9NYT6 803 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 LYVE1Q9Y5Y7 322 aa17.88■□□□□ 0.45
SKA3-205ENST00000465471 TCRBV3S1A0A5B6 114 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 DEFB108AA8MXU0 73 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 EFCAB9A8MZ26 197 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 SAGP10523 405 aaPredicted RBP17.87■□□□□ 0.45
SKA3-205ENST00000465471 GPR4P46093 362 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 TAB1Q15750 504 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 GABRA6Q16445 453 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 C20orf196Q8IYI0 205 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 LRRC75AQ8NAA5 344 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 OR4C15Q8NGM1 316 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 ADAD1Q96M93 576 aaKnown RBP17.87■□□□□ 0.45
SKA3-205ENST00000465471 MUS81Q96NY9 551 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 INIPQ9NRY2 104 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 RASSF1Q9NS23 344 aa17.87■□□□□ 0.45
SKA3-205ENST00000465471 ABCA4P78363 2273 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 TRAV27A0A087WT01 109 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 DHRS12A0PJE2 317 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 OR5H1A6NKK0 313 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 ZNF587BE7ETH6 402 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 CLOCKO15516 846 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 RAD51DO75771 328 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 SERPINI2O75830 405 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 KRT36O76013 467 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 HRGP04196 525 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 F13BP05160 661 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 HOXB6P17509 224 aaKnown RBP17.86■□□□□ 0.45
SKA3-205ENST00000465471 LOXP28300 417 aaPredicted RBP17.86■□□□□ 0.45
SKA3-205ENST00000465471 BIDP55957 195 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 TIMM23BQ5SRD1 257 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 PHYHD1Q5SRE7 291 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 OR7E24Q6IFN5 339 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 RRM2BQ7LG56 351 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 OAFQ86UD1 273 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 P2RY8Q86VZ1 359 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 CDK20Q8IZL9 346 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 OR13C2Q8NGS9 318 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 CANT1Q8WVQ1 401 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 HSD17B8Q92506 261 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 FAM46AQ96IP4 442 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms