RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GOSR1O95249 250 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 TMIGD3P0DMS9 266 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 ZNF23P17027 643 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 ZNF43P17038 809 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 FPR3P25089 353 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 PUDPQ08623 228 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 C1DQ13901 141 aaKnown RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 POU4F3Q15319 338 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 PXKQ7Z7A4 578 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 P3H2Q8IVL5 708 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 OR10G2Q8NGC3 310 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 OR4C15Q8NGM1 316 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 ZNF417Q8TAU3 575 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 OXGR1Q96P68 337 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 ZNF587Q96SQ5 575 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 SRXN1Q9BYN0 137 aa15.5■□□□□ 0.07
CPSF4-209ENST00000465132 PDP1Q9P0J1 537 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 STX18Q9P2W9 335 aaKnown RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 HRNRQ86YZ3 2850 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-209ENST00000465132 UNC119BA6NIH7 251 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 OR6C65A6NJZ3 312 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ADAP00813 363 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 YES1P07947 543 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ASAH2BP0C7U1 165 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ADORA3P0DMS8 318 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 SLC16A1P53985 500 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ELF3P78545 371 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ZP4Q12836 540 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 FOXF2Q12947 444 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 TSPAN31Q12999 210 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ZBED5Q49AG3 693 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ABLIM2Q6H8Q1 611 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 TBPL2Q6SJ96 375 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 GPAT4Q86UL3 456 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 UEVLDQ8IX04 471 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 TMEM99Q8N816 258 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 WFDC11Q8NEX6 87 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ANKK1Q8NFD2 765 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 LRTOMTQ8WZ04 291 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 ROBO4Q8WZ75 1007 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 FAM46AQ96IP4 442 aaKnown RBP15.49■□□□□ 0.07
CPSF4-209ENST00000465132 SFXN3Q9BWM7 321 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 DGCR6LQ9BY27 220 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 C20orf141Q9NUB4 165 aa15.49■□□□□ 0.07
CPSF4-209ENST00000465132 MAP1AP78559 2803 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-209ENST00000465132 NAV3Q8IVL0 2385 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 IGKV3D-15A0A087WSY6 115 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 A0A1W2PNV4 684 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 A0A1W2PRG6 482 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 BLOC1S5-TXNDC5H3BN57 136 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 PLPP3O14495 311 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 RNF13O43567 381 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 BAG2O95816 211 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 AHCYP23526 432 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 OMPP47874 163 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 SEC23BQ15437 767 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 FAM214BQ7L5A3 538 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 GALNT5Q7Z7M9 940 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 STK32CQ86UX6 486 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 PQLC1Q8N2U9 271 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 ATG16L2Q8NAA4 619 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 AQP11Q8NBQ7 271 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 MOGAT1Q96PD6 335 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 C9orf16Q9BUW7 83 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 RBM24Q9BX46 236 aaKnown RBP15.48■□□□□ 0.07
CPSF4-209ENST00000465132 TEX12Q9BXU0 123 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 PIGMQ9H3S5 423 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 BCO1Q9HAY6 547 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 C8orf4Q9NR00 106 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 KLHL13Q9P2N7 655 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 HIF3AQ9Y2N7 669 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 ORC6Q9Y5N6 252 aa15.48■□□□□ 0.07
CPSF4-209ENST00000465132 NIPBLQ6KC79 2804 aaeCLIP15.47■□□□□ 0.07
CPSF4-209ENST00000465132 H3BNX3 289 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 PIP5K1CO60331 668 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 SS18L1O75177 396 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-209ENST00000465132 TGM6O95932 706 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 HRGP04196 525 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 NR2C1P13056 603 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 CDH2P19022 906 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-209ENST00000465132 PTNP21246 168 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 CBLP22681 906 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 GPR4P46093 362 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 SLC17A1Q14916 467 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 PGBD2Q6P3X8 592 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 CD300LDQ6UXZ3 194 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 SLC46A3Q7Z3Q1 461 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 ZER1Q7Z7L7 766 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 OR52L1Q8NGH7 329 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 DNAJA3Q96EY1 480 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 ADAD1Q96M93 576 aaKnown RBP15.47■□□□□ 0.07
CPSF4-209ENST00000465132 DACH2Q96NX9 599 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 GALNT8Q9NY28 637 aa15.47■□□□□ 0.07
CPSF4-209ENST00000465132 DOCK7Q96N67 2140 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 NPIPB13A6NJU9 1138 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 NPIPB4C9JG80 1138 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 MRPL33O75394 65 aaKnown RBP15.46■□□□□ 0.07
CPSF4-209ENST00000465132 AQP8O94778 261 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 NDUFB2O95178 105 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 MAKP20794 623 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms