RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 MAP6Q96JE9 813 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 ADAD1Q96M93 576 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 CCNL2Q96S94 520 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.96■□□□□ 0.313e-7■■■■■ 28.3
TSPAN4-210ENST00000464987 CHRDQ9H2X0 955 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 AUNIPQ9H7T9 357 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 ZNF304Q9HCX3 659 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 SPATA2Q9UM82 520 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 ZNF281Q9Y2X9 895 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 PCDHGA9Q9Y5G4 932 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 CPAMD8Q8IZJ3 1885 aa16.96■□□□□ 0.31
TSPAN4-210ENST00000464987 C11orf98E9PRG8 122 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 AKR7A3O95154 331 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 NUDT14O95848 222 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 IGF2P01344 180 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 CD1AP06126 327 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 SLC25A1P53007 311 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 BCL2L15Q5TBC7 163 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 LIPNQ5VXI9 398 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 SLC16A9Q7RTY1 509 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 SIAH3Q8IW03 269 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 TCTE3Q8IZS6 198 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 SLC25A45Q8N413 288 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 ASCC1Q8N9N2 400 aaKnown RBP16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 ZNF671Q8TAW3 534 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 FOXN4Q96NZ1 517 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 SYT4Q9H2B2 425 aa16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 UBE2ZQ9H832 354 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-210ENST00000464987 FREM3P0C091 2139 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 A0A0A6YYJ9 748 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 FAM47E-STBD1D6RA91 191 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 NDUFB5O43674 189 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 TSPAN2O60636 221 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 UBL3O95164 117 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 PLGP00747 810 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 FBLP22087 321 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 HSF2Q03933 536 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 PRR23CQ6ZRP0 262 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 KANSL1Q7Z3B3 1105 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 CMTM4Q8IZR5 234 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 WWTR1Q9GZV5 400 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 FKRPQ9H9S5 495 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 NUDT15Q9NV35 164 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 FRRS1LQ9P0K9 344 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 MKL2Q9ULH7 1088 aa16.95■□□□□ 0.3
TSPAN4-210ENST00000464987 IGHV3-20A0A0C4DH32 117 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 GPRIN2O60269 458 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 ABHD16AO95870 558 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 TXNDC12O95881 172 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 ANKRD34CP0C6C1 535 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 APEHP13798 732 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 MMP15P51511 669 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 PLCXD2Q0VAA5 305 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 ARHGAP40Q5TG30 622 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 C16orf47Q6ZP98 133 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 DPY19L4Q7Z388 723 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 CDC20BQ86Y33 519 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 PM20D2Q8IYS1 436 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 D2HGDHQ8N465 521 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 TOMM5Q8N4H5 51 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 OR6N2Q8NGY6 317 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 OMA1Q96E52 524 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 MVB12AQ96EY5 273 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 TAS2R5Q9NYW4 299 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 CTSFQ9UBX1 484 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 SCO2O43819 266 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 BGLAPP02818 100 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 GIMD1P0DJR0 217 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 ABCD3P28288 659 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 SOX2P48431 317 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 ODF4Q2M2E3 257 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 FAM199XQ6PEV8 388 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 SERPINA12Q8IW75 414 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 SLC25A36Q96CQ1 311 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 AMELYQ99218 206 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 DPYSL5Q9BPU6 564 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 SLC6A5Q9Y345 797 aa16.94■□□□□ 0.3
TSPAN4-210ENST00000464987 ARHGEF9O43307 516 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 CXCR1P25024 350 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 GIFP27352 417 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 CCR6P51684 374 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 FAPQ12884 760 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 YIF1BQ5BJH7 314 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 HLA-DQA1Q5Y7H0 255 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 LRRC69Q6ZNQ3 347 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 NUDT22Q9BRQ3 303 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 MFRPQ9BY79 579 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 TEKT2Q9UIF3 430 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 MRTO4Q9UKD2 239 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 MOKQ9UQ07 419 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 EXPH5Q8NEV8 1989 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 IFITM5A6NNB3 132 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 NUDT21O43809 227 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 PRKCAP17252 672 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 FCRLAQ7L513 359 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 PLXDC1Q8IUK5 500 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 OR10AC1Q8NH08 325 aa16.93■□□□□ 0.3
TSPAN4-210ENST00000464987 AKAP1Q92667 903 aaKnown RBP eCLIP16.93■□□□□ 0.37e-7■■■■□ 20.3
TSPAN4-210ENST00000464987 SLC25A38Q96DW6 304 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms