RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 OR5AK2Q8NH90 309 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 ZNF417Q8TAU3 575 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 ZNRF4Q8WWF5 429 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 THRSPQ92748 146 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 HOXB13Q92826 284 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 SMIM10Q96HG1 83 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 SEMA4CQ9C0C4 833 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 SLC7A5P2Q9GIP4 190 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 TSPAN10Q9H1Z9 355 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 EXO5Q9H790 373 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 KIR3DX1Q9H7L2 352 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 IL21RQ9HBE5 538 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 MKKSQ9NPJ1 570 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 RXFP3Q9NSD7 469 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 FBXO34Q9NWN3 711 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 DNAJB12Q9NXW2 375 aaKnown RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 SLC39A1Q9NY26 324 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 SPHK1Q9NYA1 384 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 TAS2R3Q9NYW6 316 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 ACTR10Q9NZ32 417 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 GPN3Q9UHW5 284 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 PQLC2LA1A4F0 135 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 SYNDIG1LA6NDD5 238 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 OR6C68A6NDL8 312 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 TTLL8A6PVC2 850 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 HSPB2A8KAH6 182 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 IDSB3KWA1 339 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 PRRT4C9JH25 899 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 SULT1C2O00338 296 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 B3GALT2O43825 422 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 SRPX2O60687 465 aaPredicted RBP6.65□□□□□ -1.34
USP48-206ENST00000464577 PQBP1O60828 265 aaKnown RBP6.65□□□□□ -1.34
USP48-206ENST00000464577 UPK3AO75631 287 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 CTAG2O75638 210 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ATG12O94817 140 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 RASGRP1O95267 797 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ABHD16AO95870 558 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 INHAP05111 366 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ANXA2P07355 339 aaKnown RBP6.65□□□□□ -1.34
USP48-206ENST00000464577 RHOP08100 348 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 GTF2F2P13984 249 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ADH7P40394 386 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 STARP49675 285 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 GPR143P51810 404 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ACTBP60709 375 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 UBE2MP61081 183 aaKnown RBP6.65□□□□□ -1.34
USP48-206ENST00000464577 ACTG1P63261 375 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 GRM7Q14831 915 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 HSPB2Q16082 182 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 C4orf46Q504U0 113 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 TCEAL5Q5H9L2 206 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 LINC01590Q5TEZ4 76 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 NKAIN2Q5VXU1 208 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 GLT8D1Q68CQ7 371 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 JMJD6Q6NYC1 403 aaPredicted RBP6.65□□□□□ -1.34
USP48-206ENST00000464577 ULK3Q6PHR2 472 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 FIGNL1Q6PIW4 674 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 RAB11FIP2Q7L804 512 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ZNF546Q86UE3 836 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 ARMC10Q8N2F6 343 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 CLEC1AQ8NC01 280 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 OR4D10Q8NGI6 311 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 OR51S1Q8NGJ8 323 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 OR5M8Q8NGP6 311 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 OR6K6Q8NGW6 343 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 NMNAT3Q96T66 252 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 SLC25A21Q9BQT8 299 aaPredicted RBP6.65□□□□□ -1.34
USP48-206ENST00000464577 SCPEP1Q9HB40 452 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 LYRM4Q9HD34 91 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 DAPP1Q9UN19 280 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 TNFSF18Q9UNG2 199 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 SLC22A7Q9Y694 548 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 NUP210LQ5VU65 1888 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 LTBP2Q14767 1821 aa6.65□□□□□ -1.34
USP48-206ENST00000464577 IGLON5A6NGN9 336 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 FGF18O76093 207 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 NKX2-2O95096 273 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 OR4E1P0C645 316 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 SLC35G6P0C7Q6 338 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 ZNF10P21506 573 aaPredicted RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 PRSS3P35030 304 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 RPL4P36578 427 aaKnown RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 MAGEB1P43366 347 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 PSMD4P55036 377 aaKnown RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 RPS4XP62701 263 aaKnown RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 PPIAP62937 165 aaKnown RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 SP3Q02447 781 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 RUNX2Q13950 521 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 MICBQ29980 383 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 STEAP1BQ6NZ63 245 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 RTL10Q7L3V2 364 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 ZNF550Q7Z398 422 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 OR2W3Q7Z3T1 314 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 OR4N5Q8IXE1 308 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 BEST3Q8N1M1 668 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 SVBPQ8N300 66 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 EXD3Q8N9H8 876 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 TMEM229BQ8NBD8 167 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms