RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ICOSLGO75144 302 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 LRATO95237 230 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 APOA1P02647 267 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 CAPN1P07384 714 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 PABPC4LP0CB38 370 aaKnown RBP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 HNF1AP20823 631 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 MSR1P21757 451 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 U2AF2P26368 475 aaKnown RBP eCLIP3.66□□□□□ -1.821e-10■■□□□ 14.2
PTCD3-205ENST00000464541 RPS10P46783 165 aaKnown RBP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 KPNA2P52292 529 aaKnown RBP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 BIDP55957 195 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 RGS8P57771 180 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 TAS2R19P59542 299 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 HERVK_113P61574 105 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 YWHAGP61981 247 aaKnown RBP eCLIP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 SELENOTP62341 195 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 PJVKQ0ZLH3 352 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 BST1Q10588 318 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 MAB21L1Q13394 359 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 CTSL3PQ5NE16 218 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 C1orf100Q5SVJ3 147 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 LRRC66Q68CR7 880 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 VTCN1Q7Z7D3 282 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 ZNF786Q8N393 782 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 PNKDQ8N490 385 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 STXBP6Q8NFX7 210 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 OR4C5Q8NGB2 326 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 OR10G3Q8NGC4 313 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 KCNG3Q8TAE7 436 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 FAM151AQ8WW52 585 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 HTR3CQ8WXA8 447 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 MSANTD3Q96H12 275 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 BLZF1Q9H2G9 400 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 SYNDIG1Q9H7V2 258 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 PARVGQ9HBI0 331 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 RPH3ALQ9UNE2 315 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 PRG3Q9Y2Y8 225 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 V9GY05 133 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 IGHV1OR21-1A0A087WYE8 117 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 A6NDX4 124 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 BTBD17A6NE02 478 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 C9JVG2 144 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 NBR2O15453 112 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 TAPBPO15533 448 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 OR10H3O60404 316 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 NEBLO76041 1014 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 TM7SF2O76062 418 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 MMP1P03956 469 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 S100A6P06703 90 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 CHMLP26374 656 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 PTGDSP41222 190 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 KIR2DS4P43632 304 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 SLC11A1P49279 550 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 C21orf59P57076 290 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 RPS15P62841 145 aaKnown RBP3.65□□□□□ -1.83
PTCD3-205ENST00000464541 TPM4P67936 248 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 MERTKQ12866 999 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 EBI3Q14213 229 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 FAM83EQ2M2I3 478 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 NSUN5P1Q3KNT7 163 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 COX15Q7KZN9 410 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 MYOCDQ8IZQ8 938 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 OFCC1Q8IZS5 231 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 Q8N9W7 124 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 OR6X1Q8NH79 312 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 MARCH1Q8TCQ1 289 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 COQ2Q96H96 371 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 SEC22AQ96IW7 307 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 CATSPER2Q96P56 530 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 OR2M2Q96R28 347 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 KCNA7Q96RP8 456 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 RASL11BQ9BPW5 248 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 MRPL37Q9BZE1 423 aaKnown RBP3.65□□□□□ -1.83
PTCD3-205ENST00000464541 C8orf33Q9H7E9 229 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-205ENST00000464541 TMEM185BQ9H7F4 350 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 SIGLEC8Q9NYZ4 499 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 GCNT4Q9P109 453 aa3.65□□□□□ -1.83
PTCD3-205ENST00000464541 AK6Q9Y3D8 172 aaKnown RBP3.65□□□□□ -1.83
PTCD3-205ENST00000464541 ARID1AO14497 2285 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 RLFQ13129 1914 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 SMCO3A2RU48 225 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 METTL21EPA6NDL7 271 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 VSTM2BA6NLU5 285 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 TRDCB7Z8K6 153 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 GOLGA8TH3BQL2 631 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF701M0R085 212 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 LSM1O15116 133 aaKnown RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 SNAI2O43623 268 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 IGHG4P01861 327 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 P04436 131 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 HSMCR30P0CW71 290 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 POU2F1P14859 743 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 CRISP2P16562 243 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF3P17036 446 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 KLK7P49862 253 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 CRYBB1P53674 252 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-205ENST00000464541 HSPA2P54652 639 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 CLDN8P56748 225 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 UNC119Q13432 240 aa3.64□□□□□ -1.83
PTCD3-205ENST00000464541 GANABQ14697 944 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms