RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 NKAIN4Q8IVV8 208 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 CCDC36Q8IYA8 594 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 DEFB107AQ8IZN7 70 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 KDM8Q8N371 416 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 TMEM255BQ8WV15 326 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 CREBBPQ92793 2442 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 ARPC4-TTLL3A0A0A6YYG9 625 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF726A6NNF4 738 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 NCK1P16333 377 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 RHCEP18577 417 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 PRPS1P60891 318 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 TESK1Q15569 626 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 MTX3Q5HYI7 312 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 ANKRD16Q6P6B7 361 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 DEPDC4Q8N2C3 294 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 OR1K1Q8NGR3 316 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 OR6X1Q8NH79 312 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 ACOT11Q8WXI4 607 aaPredicted RBP11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 ALPK1Q96QP1 1244 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 CXXC4Q9H2H0 198 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 TAS2R5Q9NYW4 299 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 EGFL7Q9UHF1 273 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 PRPF19Q9UMS4 504 aaKnown RBP11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 FAM32AQ9Y421 112 aaKnown RBP11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 A0A1W2PPR1 153 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 B2RBV5 119 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 ENTPD5O75356 428 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 PRSS23O95084 383 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 UMPSP11172 480 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 FUT1P19526 365 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 PTAFRP25105 342 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 IST1P53990 364 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 ROR2Q01974 943 aaKnown RBP11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 KEAP1Q14145 624 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 TAF11Q15544 211 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 SPNS3Q6ZMD2 512 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 FAM169BQ8N8A8 192 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 BCL2L2Q92843 193 aaPredicted RBP11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 PIGTQ969N2 578 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 NSMCE2Q96MF7 247 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 C1orf21Q9H246 121 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 GPR35Q9HC97 309 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 MAN2C1Q9NTJ4 1040 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 TMEM5Q9Y2B1 443 aa11.47□□□□□ -0.57
R3HDM1-213ENST00000463230 LRBAP50851 2863 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 A0A1W2PRQ8 180 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 LRRN3E7EW58 273 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 KPNA4O00629 521 aaPredicted RBP11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 HS3ST1O14792 307 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 ARPC2O15144 300 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 UPK3AO75631 287 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 AHCYP23526 432 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC9A3P48764 834 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 SMIM11AP58511 58 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 DGCR6Q14129 220 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 ZNF611Q8N823 705 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 FAM156AQ8NDB6 213 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 PYURFQ96I23 114 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 ALKBH3Q96Q83 286 aaPredicted RBP11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 NDEL1Q9GZM8 345 aa11.46□□□□□ -0.57
R3HDM1-213ENST00000463230 A0A1W2PRG6 482 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 SLC35F4A4IF30 521 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 FFAR1O14842 300 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 RNF13O43567 381 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 SEMG1P04279 462 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 CD53P19397 219 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 PTNP21246 168 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 DAP3P51398 398 aaKnown RBP11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 FOXG1P55316 489 aaPredicted RBP11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 PRKCDQ05655 676 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 SLC35D2Q76EJ3 337 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 ZNF627Q7L945 461 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 CDK20Q8IZL9 346 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 RBM15BQ8NDT2 890 aaKnown RBP11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 PFN4Q8NHR9 129 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 BCAS4Q8TDM0 211 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 NRGNQ92686 78 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 C7orf34Q96L11 122 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 DHRS1Q96LJ7 313 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 PLEKHA6Q9Y2H5 1048 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 HIF3AQ9Y2N7 669 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 SPG11Q96JI7 2443 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 DPRXA6NFQ7 191 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 H1F0P07305 194 aaKnown RBP11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 NR2C1P13056 603 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 HLA-DOBP13765 273 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 DEFB113Q30KQ7 82 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 TBRG1Q3YBR2 411 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 LSRQ86X29 649 aaPredicted RBP11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
R3HDM1-213ENST00000463230 MCUR1Q96AQ8 359 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms