RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 RDH12Q96NR8 316 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 SCNM1Q9BWG6 230 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 POLR2J2Q9GZM3 115 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 POLR2J3Q9H1A7 115 aaKnown RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ZBTB20Q9HC78 741 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-204ENST00000462658 CTPS2Q9NRF8 586 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 FLRT3Q9NZU0 649 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 KIF17Q9P2E2 1029 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 ORC6Q9Y5N6 252 aa6.63□□□□□ -1.35
UBE4B-204ENST00000462658 LOC101059948A0A1B0GTJ6 334 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 A0A1W2PQ72 361 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 SH3PXD2BA1X283 911 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ARRDC5A6NEK1 342 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 OR6C70A6NIJ9 312 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 H3BNH8 94 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 GTPBP1O00178 669 aaKnown RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 FAAHO00519 579 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ADAM10O14672 748 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 FMO6PO60774 539 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 MITFO75030 526 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ICOSLGO75144 302 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 UGT2B11O75310 529 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 OR5F1O95221 314 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 NADKO95544 446 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 UBTFL6P0CB48 400 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ICAM2P13598 275 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 NAGAP17050 411 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 IGFBP2P18065 325 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 CDH2P19022 906 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 F8A1P23610 371 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ELAVL4P26378 380 aaKnown RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 CD82P27701 267 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 CAPGP40121 348 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ACAA2P42765 397 aaKnown RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ADARB1P78563 741 aaKnown RBP6.62□□□□□ -1.35
UBE4B-204ENST00000462658 IL1RL1Q01638 556 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 EPS8Q12929 822 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 EFR3AQ14156 821 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 TRAM2Q15035 370 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 OR1Q1Q15612 314 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 SLC36A3Q495N2 470 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 PODNL1Q6PEZ8 512 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 APOOLQ6UXV4 268 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF550Q7Z398 422 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 GALNT5Q7Z7M9 940 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 MOGAT3Q86VF5 341 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 UEVLDQ8IX04 471 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF440Q8IYI8 595 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 OFCC1Q8IZS5 231 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 LINC00471Q8N535 108 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF555Q8NEP9 628 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 OR9Q2Q8NGE9 314 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 SLC7A13Q8TCU3 470 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ADAMTS16Q8TE57 1224 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 SLC38A4Q969I6 547 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 SLC35B4Q969S0 331 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 CNBD2Q96M20 576 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 FEVQ99581 238 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 PSD2Q9BQI7 771 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 FUZQ9BT04 418 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 PRSS22Q9GZN4 317 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ANKRD19PQ9H560 264 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF556Q9HAH1 456 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 TMEM27Q9HBJ8 222 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF160Q9HCG1 818 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 MMP25Q9NPA2 562 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 NRIP3Q9NQ35 241 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 KRT84Q9NSB2 600 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 MAN2C1Q9NTJ4 1040 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 FAM118AQ9NWS6 357 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 SLC35A3Q9Y2D2 325 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 NTNG1Q9Y2I2 539 aa6.62□□□□□ -1.35
UBE4B-204ENST00000462658 APC2O95996 2303 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 KNTC1P50748 2209 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 A0A087WUU8 490 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 A0A1W2PQD3 144 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 TRAPPC13A5PLN9 417 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 FAM90A20PA6NIJ5 464 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 CDRT15L2A8MXV6 281 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 B9A039 149 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 H0YAE9 185 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 OR10H3O60404 316 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 FADS1O60427 444 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF354AO60765 605 aaPredicted RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 OR2J2O76002 312 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 HPP00738 406 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 THY1P04216 161 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 NGFRP08138 427 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 UBL4AP11441 157 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 POU2F1P14859 743 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 CBLP22681 906 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 HTR2AP28223 471 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 RYKP34925 604 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF91Q05481 1191 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 PDK3Q15120 406 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 CD226Q15762 336 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 NDUFAF6Q330K2 333 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 TBRG1Q3YBR2 411 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms