RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SLC18A1P54219 525 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 PMS2P3Q13401 168 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 GKAP1Q5VSY0 366 aaPredicted RBP13.32□□□□□ -0.28
SKA3-204ENST00000462482 FAM91A1Q658Y4 838 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 REP15Q6BDI9 236 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 BHLHE22Q8NFJ8 381 aaPredicted RBP13.32□□□□□ -0.28
SKA3-204ENST00000462482 OR6N1Q8NGY5 312 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 NFKBIDQ8NI38 313 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 OR52B2Q96RD2 323 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 SNX18Q96RF0 628 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 ZNF607Q96SK3 696 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 PAIP1Q9H074 479 aaKnown RBP13.32□□□□□ -0.28
SKA3-204ENST00000462482 NOX3Q9HBY0 568 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 B3GAT1Q9P2W7 334 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 SEC14L4Q9UDX3 406 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 ALPK2Q86TB3 2170 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 POLR3GO15318 223 aaPredicted RBP13.31□□□□□ -0.28
SKA3-204ENST00000462482 ENTPD5O75356 428 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 SERPINB7O75635 380 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 SEC14L2O76054 403 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 RAB36O95755 333 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 TACSTD2P09758 323 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 RGS8P57771 180 aaPredicted RBP13.31□□□□□ -0.28
SKA3-204ENST00000462482 RPS23P62266 143 aaKnown RBP13.31□□□□□ -0.28
SKA3-204ENST00000462482 CDK6Q00534 326 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 GALK2Q01415 458 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 DHRS4L2Q6PKH6 230 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 ZNF813Q6ZN06 617 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 C20orf196Q8IYI0 205 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 TMEM123Q8N131 208 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 RFLNBQ8N5W9 214 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 SCAIQ8N9R8 606 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 OR6S1Q8NH40 331 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 LRR1Q96L50 414 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 ULBP2Q9BZM5 246 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 MS4A5Q9H3V2 200 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 EVA1AQ9H8M9 152 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 KLHL14Q9P2G3 628 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 TESQ9UGI8 421 aaKnown RBP13.31□□□□□ -0.28
SKA3-204ENST00000462482 TMEFF2Q9UIK5 374 aaPredicted RBP13.31□□□□□ -0.28
SKA3-204ENST00000462482 FBXL3Q9UKT7 428 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 RAB21Q9UL25 225 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 CORO2BQ9UQ03 480 aa13.31□□□□□ -0.28
SKA3-204ENST00000462482 PLCE1Q9P212 2302 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 A0A087WUJ7 227 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 EVPLLA8MZ36 301 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 M0R233 179 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 TCF21O43680 179 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 TRAF3IP2O43734 574 aaPredicted RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 SYNGR3O43761 229 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 FZD7O75084 574 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 HLA-HP01893 362 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 C8BP07358 591 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 VIMP08670 466 aaKnown RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 ARAFP10398 606 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 NR4A1P22736 598 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 SLC6A2P23975 617 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 EVX1P49640 407 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 MAGOHP61326 146 aaKnown RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 POU3F1Q03052 451 aaPredicted RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 RANBP3LQ86VV4 465 aaPredicted RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 ZCCHC24Q8N2G6 241 aaKnown RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 DENND2DQ9H6A0 471 aaPredicted RBP13.3□□□□□ -0.28
SKA3-204ENST00000462482 REV1Q9UBZ9 1251 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 USH1CQ9Y6N9 552 aa13.3□□□□□ -0.28
SKA3-204ENST00000462482 OR6A2O95222 327 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 AHCYP23526 432 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 HTR2AP28223 471 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 PIGFQ07326 219 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 PUDPQ08623 228 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 SCGB2A2Q13296 93 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 MAVSQ7Z434 540 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 MYPOPQ86VE0 399 aaPredicted RBP13.29□□□□□ -0.28
SKA3-204ENST00000462482 MRPL24Q96A35 216 aaKnown RBP13.29□□□□□ -0.28
SKA3-204ENST00000462482 ZNF837Q96EG3 531 aaPredicted RBP13.29□□□□□ -0.28
SKA3-204ENST00000462482 EMC6Q9BV81 110 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 TPK1Q9H3S4 243 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 TCF7L2Q9NQB0 619 aa13.29□□□□□ -0.28
SKA3-204ENST00000462482 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.29□□□□□ -0.28
SKA3-204ENST00000462482 IGKV1D-42A0A075B6H8 117 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 MS4A18H0YCH9 400 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 LILRA1O75019 489 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 SERPINI2O75830 405 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 UBL3O95164 117 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 TGDSO95455 350 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
SKA3-204ENST00000462482 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 CDH15P55291 814 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 SELENOVP59797 346 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 SRSF2Q01130 221 aaKnown RBP13.28□□□□□ -0.28
SKA3-204ENST00000462482 SCARB2Q14108 478 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 OR1Q1Q15612 314 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 MS4A18Q3C1V0 323 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 SWT1Q5T5J6 900 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms