RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 TACSTD2P09758 323 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 APEX1P27695 318 aaKnown RBP13.9□□□□□ -0.18
COL7A1-204ENST00000462475 CHN2P52757 468 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 SLC18A1P54219 525 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 MAGOHP61326 146 aaKnown RBP13.9□□□□□ -0.18
COL7A1-204ENST00000462475 DAG1Q14118 895 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 TRIP10Q15642 601 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 ADRM1Q16186 407 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 GCNT6Q5T4J0 391 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 DHRS4L2Q6PKH6 230 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 UEVLDQ8IX04 471 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 C20orf196Q8IYI0 205 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 ZNF786Q8N393 782 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 GOLGA6L1Q8N7Z2 621 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 ADPRHL1Q8NDY3 354 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 DNAJA4Q8WW22 397 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-204ENST00000462475 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 EMC6Q9BV81 110 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 TPK1Q9H3S4 243 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 MED29Q9NX70 200 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 B3GNT2Q9NY97 397 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 SLAMF8Q9P0V8 285 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 USP22Q9UPT9 525 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 A0A087WUJ7 227 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 VSTM5A8MXK1 200 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 LYNX1G3V0Z9 82 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 MS4A18H0YCH9 400 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 ADRA2AP08913 450 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 LYNX1P0DP58 116 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 NQO1P15559 274 aaKnown RBP13.89□□□□□ -0.19
COL7A1-204ENST00000462475 POU3F1Q03052 451 aaPredicted RBP13.89□□□□□ -0.19
COL7A1-204ENST00000462475 RIN1Q13671 783 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 MS4A18Q3C1V0 323 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 LRIF1Q5T3J3 769 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 EPGNQ6UW88 154 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 NET1Q7Z628 596 aaPredicted RBP13.89□□□□□ -0.19
COL7A1-204ENST00000462475 FUNDC1Q8IVP5 155 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 CCDC36Q8IYA8 594 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 UBASH3BQ8TF42 649 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 SLC41A3Q96GZ6 507 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 WFDC6Q9BQY6 131 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 MRPL37Q9BZE1 423 aaKnown RBP13.89□□□□□ -0.19
COL7A1-204ENST00000462475 NKIRAS1Q9NYS0 192 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 TESQ9UGI8 421 aaKnown RBP13.89□□□□□ -0.19
COL7A1-204ENST00000462475 USH1CQ9Y6N9 552 aa13.89□□□□□ -0.19
COL7A1-204ENST00000462475 A0A0B4J2E0 115 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 A0A1B0GX12 115 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 LRRN3E7EW58 273 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 BGLAPP02818 100 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 CD79AP11912 226 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 IFNGR1P15260 489 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 B4GALT1P15291 398 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 NR4A1P22736 598 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
COL7A1-204ENST00000462475 AQP5P55064 265 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 STX1BP61266 288 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 NCALDP61601 193 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 CDK6Q00534 326 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 CCNIQ14094 377 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 SQLEQ14534 574 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 GSG1Q2KHT4 349 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 FAM91A1Q658Y4 838 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 REEP3Q6NUK4 255 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 ULK3Q6PHR2 472 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 NHLRC1Q6VVB1 395 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 ZNF813Q6ZN06 617 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 IL17RDQ8NFM7 739 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 RNF217Q8TC41 542 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 HPS1Q92902 700 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 MRPL24Q96A35 216 aaKnown RBP13.88□□□□□ -0.19
COL7A1-204ENST00000462475 TLCD1Q96CP7 247 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 TXNDC15Q96J42 360 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 ZNF75AQ96N20 296 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 MOGAT1Q96PD6 335 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 VAPAQ9P0L0 249 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 CMAHPQ9Y471 501 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
COL7A1-204ENST00000462475 TPST2O60704 377 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 ZNF14P17017 642 aaPredicted RBP13.87□□□□□ -0.19
COL7A1-204ENST00000462475 AQP1P29972 269 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 CDH15P55291 814 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 RGS8P57771 180 aaPredicted RBP13.87□□□□□ -0.19
COL7A1-204ENST00000462475 PIGFQ07326 219 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 SCARB2Q14108 478 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 MFSD13AQ14CX5 517 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 OR1Q1Q15612 314 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 PAGE3Q5JUK9 113 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 ZNF627Q7L945 461 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 KRT73Q86Y46 540 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 SCAIQ8N9R8 606 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 LINC01356Q8N9X3 169 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 OR6S1Q8NH40 331 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 SLC47A1Q96FL8 570 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 C1orf159Q96HA4 380 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 SPATA5L1Q9BVQ7 753 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 ASPNQ9BXN1 380 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 ULBP2Q9BZM5 246 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 TCF7L2Q9NQB0 619 aa13.87□□□□□ -0.19
COL7A1-204ENST00000462475 ZNF224Q9NZL3 707 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms