RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MED29Q9NX70 200 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 PRSS50Q9UI38 385 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 RCE1Q9Y256 329 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 SIGLEC7Q9Y286 467 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 USP9YO00507 2555 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-221ENST00000462352 SPTAN1Q13813 2472 aaKnown RBP10.44□□□□□ -0.74
CPNE1-221ENST00000462352 A0A1W2PRG6 482 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 SLC35F4A4IF30 521 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 C19orf84I3L1E1 186 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF432O94892 652 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 IGHV3-9P01782 118 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 POU2F1P14859 743 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 IFNGR1P15260 489 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF26P17031 533 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-221ENST00000462352 GRNP28799 593 aaKnown RBP10.43□□□□□ -0.74
CPNE1-221ENST00000462352 FXYD6P3P58550 94 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 TSPAN31Q12999 210 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 MELKQ14680 651 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 HMBOX1Q6NT76 420 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 AMIGO2Q86SJ2 522 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 IGFN1Q86VF2 1251 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 WDFY1Q8IWB7 410 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 HS3ST5Q8IZT8 346 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 LRRC75AQ8NAA5 344 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 RNASE6Q93091 150 aaKnown RBP10.43□□□□□ -0.74
CPNE1-221ENST00000462352 LRRC46Q96FV0 321 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 PSMG3-AS1Q96PY0 264 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 BDH2Q9BUT1 245 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 DGCR6LQ9BY27 220 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 NPDC1Q9NQX5 325 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-221ENST00000462352 GALNT8Q9NY28 637 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 PDP1Q9P0J1 537 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-221ENST00000462352 MGAT4BQ9UQ53 548 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 CACNA1CQ13936 2221 aa10.43□□□□□ -0.74
CPNE1-221ENST00000462352 ARRDC5A6NEK1 342 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF726A6NNF4 738 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 MCIDASD6RGH6 385 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 PRSS44E7EML9 344 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 SLC43A1O75387 559 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 NDUFB2O95178 105 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 CNOT4O95628 575 aaKnown RBP10.42□□□□□ -0.74
CPNE1-221ENST00000462352 BCL10O95999 233 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 PRKACGP22612 351 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 CD79BP40259 229 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 ARHGDIAP52565 204 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 BIDP55957 195 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 CTXN1P60606 82 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 FAM27E3Q08E93 113 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 TAF11Q15544 211 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 ACKR1Q16570 336 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 TSPO2Q5TGU0 170 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 FBXW9Q5XUX1 488 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 SHQ1Q6PI26 577 aaKnown RBP10.42□□□□□ -0.74
CPNE1-221ENST00000462352 SMARCD3Q6STE5 483 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 Q6ZT83 130 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 TMEM123Q8N131 208 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 GABRG1Q8N1C3 465 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 UBE2J2Q8N2K1 259 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 OR5K1Q8NHB7 308 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 FANK1Q8TC84 345 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 GTPBP3Q969Y2 492 aaKnown RBP10.42□□□□□ -0.74
CPNE1-221ENST00000462352 NRBF2Q96F24 287 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 ADAD1Q96M93 576 aaKnown RBP10.42□□□□□ -0.74
CPNE1-221ENST00000462352 OR2M2Q96R28 347 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 FEVQ99581 238 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 PKP2Q99959 881 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 NIPSNAP1Q9BPW8 284 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 ENKD1Q9H0I2 346 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 SEMA6AQ9H2E6 1030 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 SLCO5A1Q9H2Y9 848 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 OR52D1Q9H346 318 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 S100A14Q9HCY8 104 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 SLC7A10Q9NS82 523 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 ELOVL5Q9NYP7 299 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 MALT1Q9UDY8 824 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 IL20RAQ9UHF4 553 aa10.42□□□□□ -0.74
CPNE1-221ENST00000462352 FOXD3Q9UJU5 478 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-221ENST00000462352 MAGED1Q9Y5V3 778 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-221ENST00000462352 FREM1Q5H8C1 2179 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 NPIPB13A6NJU9 1138 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 OR6C65A6NJZ3 312 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 NPIPB4C9JG80 1138 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 UPK3AO75631 287 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 ADAP00813 363 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 IGHMP01871 453 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 GSTM3P21266 225 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 RPL4P36578 427 aaKnown RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 DAP3P51398 398 aaKnown RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 LGALS3BPQ08380 585 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 FAPQ12884 760 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 TOP3AQ13472 1001 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-221ENST00000462352 CAMK2DQ13557 499 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 RFX4Q33E94 735 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 CARD17Q5XLA6 110 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 THSD4Q6ZMP0 1018 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 STAC2Q6ZMT1 411 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF620Q6ZNG0 422 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 RASSF6Q6ZTQ3 369 aa10.41□□□□□ -0.74
CPNE1-221ENST00000462352 CXorf67Q86X51 503 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms