RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 LAT2Q9GZY6 243 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF665Q9H7R5 613 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZMAT3Q9HA38 289 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CRLF2Q9HC73 371 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CTPS2Q9NRF8 586 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF275Q9NSD4 429 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ACER3Q9NUN7 267 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 C1orf109Q9NX04 203 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 PCDHGB4Q9UN71 923 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 FIS1Q9Y3D6 152 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 TMED7-TICAM2A0A0A6YYA0 188 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ARPC4-TTLL3A0A0A6YYG9 625 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 NPIPB9F8W1W9 429 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 H3BQF6 201 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 M0QZ24 198 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SLC28A1O00337 649 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 WNT9BO14905 357 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 STX11O75558 287 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 CHEK2O96017 543 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 AK1P00568 194 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 GPIP06744 558 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 FAM153BP0C7A2 387 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 NEFHP12036 1026 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 GATA3P23771 443 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 PRTN3P24158 256 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 LSP1P33241 339 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 RPL3P39023 403 aaKnown RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 FRKP42685 505 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 RAD52P43351 418 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ALDH3B1P43353 468 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 MAGEA12P43365 314 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 HTR3AP46098 478 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ASMTP46597 345 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 PRKAA2P54646 552 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 FOXA1P55317 472 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM33P57088 247 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 RPS23P62266 143 aaKnown RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 HPCAP84074 193 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 GALK2Q01415 458 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ROR2Q01974 943 aaKnown RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 COL10A1Q03692 680 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 BAMBIQ13145 260 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SLC17A1Q14916 467 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 OR7A5Q15622 319 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TRMT5Q32P41 509 aaKnown RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 GLIPR1L2Q4G1C9 344 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ELFN2Q5R3F8 820 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 AVPI1Q5T686 147 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ATAD3BQ5T9A4 648 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 NIPAL3Q6P499 406 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 PAQR6Q6TCH4 344 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 C17orf107Q6ZR85 190 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF771Q7L3S4 317 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 JAZF1Q86VZ6 243 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 RIBC1Q8N443 379 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ARFGAP2Q8N6H7 521 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SIGLECL1Q8N7X8 197 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 OR9K2Q8NGE7 335 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 OR5D16Q8NGK9 328 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 OR5AK3PQ8NH89 298 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SNX33Q8WV41 574 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 RAB8BQ92930 207 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM45BQ96B21 275 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 MOAP1Q96BY2 351 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 MTERF3Q96E29 417 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 CCDC126Q96EE4 140 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 L3HYPDHQ96EM0 354 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TIMD4Q96H15 378 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 METTL2AQ96IZ6 378 aaKnown RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF385AQ96PM9 386 aaKnown RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF317Q96PQ6 595 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 OR7D2Q96RA2 312 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SDF2Q99470 211 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 GPA33Q99795 319 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TAPBPLQ9BX59 468 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 NMUR2Q9GZQ4 415 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 NOX3Q9HBY0 568 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SIRT3Q9NTG7 399 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-206ENST00000461574 EXD2Q9NVH0 621 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ATAD3AQ9NVI7 634 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ADPRHL2Q9NX46 363 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM216Q9P0N5 145 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 ZDHHC2Q9UIJ5 367 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 MKLN1Q9UL63 735 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TRAPPC4Q9Y296 219 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 SLC35A3Q9Y2D2 325 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 TMED7Q9Y3B3 224 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 KCNE3Q9Y6H6 103 aa4.31□□□□□ -1.72
BRCA1-206ENST00000461574 NUP214P35658 2090 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 IGHV2OR16-5A0A0B4J2B6 119 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CENPVL1A0A0U1RR11 272 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM129A0AVI4 362 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ISPDA4D126 451 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms