RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ZNF587BE7ETH6 402 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 LRRN3E7EW58 273 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 OVOL3O00110 214 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 AKAP8O43823 692 aaKnown RBP16.1■□□□□ 0.17
COL9A2-205ENST00000461118 SLC43A1O75387 559 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 UPK3AO75631 287 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 OR5F1O95221 314 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 IGF2P01344 180 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 PTNP21246 168 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 PTAFRP25105 342 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 OR1E2P47887 323 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 GSK3BP49841 420 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 PUDPQ08623 228 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 ZNF74Q16587 644 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 LINGO2Q7L985 606 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 PXKQ7Z7A4 578 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 UEVLDQ8IX04 471 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 PHC2Q8IXK0 858 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 C10orf53Q8N6V4 93 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 LZICQ8WZA0 190 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 RADILQ96JH8 1075 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 FKRPQ9H9S5 495 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 RIMS3Q9UJD0 308 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 ARL2BPQ9Y2Y0 163 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 PLCE1Q9P212 2302 aa16.1■□□□□ 0.17
COL9A2-205ENST00000461118 RNF223E7ERA6 249 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 CXCR6O00574 342 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 CLOCKO15516 846 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 CH25HO95992 272 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 HLA-DOBP13765 273 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 PAX7P23759 505 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 RBM34P42696 430 aaKnown RBP16.09■□□□□ 0.17
COL9A2-205ENST00000461118 TAS2R41P59536 307 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 PSME3P61289 254 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 LGALS3BPQ08380 585 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 ZP4Q12836 540 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 PIN1Q13526 163 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-205ENST00000461118 ZNF672Q499Z4 452 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-205ENST00000461118 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 TMEM108Q6UXF1 575 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 TMEM123Q8N131 208 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 PIK3C3Q8NEB9 887 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 TPD52L3Q96J77 140 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 LRR1Q96L50 414 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 OR2M2Q96R28 347 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 OBP2BQ9NPH6 170 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 MEPEQ9NQ76 525 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-205ENST00000461118 ZNF229Q9UJW7 825 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 MGAT4BQ9UQ53 548 aa16.09■□□□□ 0.17
COL9A2-205ENST00000461118 MAGED1Q9Y5V3 778 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-205ENST00000461118 A0A1W2PR80 420 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 SHISA9B4DS77 424 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 MT-ND1P03886 318 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 HOXB1P14653 301 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-205ENST00000461118 SH3BGRP55822 239 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-205ENST00000461118 PRPS1P60891 318 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 IL1RL1Q01638 556 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 CLEC12BQ2HXU8 276 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 DEF8Q6ZN54 512 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 DNM1P46Q6ZS02 220 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 NKAIN4Q8IVV8 208 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 OR1K1Q8NGR3 316 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 MAGEE2Q8TD90 523 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-205ENST00000461118 BCL2L2Q92843 193 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-205ENST00000461118 FBXW5Q969U6 566 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 HS6ST2Q96MM7 605 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 ALKBH3Q96Q83 286 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-205ENST00000461118 HEATR1Q9H583 2144 aaKnown RBP16.08■□□□□ 0.16
COL9A2-205ENST00000461118 NANSQ9NR45 359 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 TAS2R5Q9NYW4 299 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 LAMP3Q9UQV4 416 aa16.08■□□□□ 0.16
COL9A2-205ENST00000461118 ABCD4O14678 606 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 GSTA4O15217 222 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 SHOX2O60902 331 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-205ENST00000461118 WNT11O96014 354 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 ASAH2BP0C7U1 165 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 DANCRP0C864 163 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 ADORA3P0DMS8 318 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-205ENST00000461118 CD40P25942 277 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 ZNF83P51522 516 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 SLC25A3Q00325 362 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 ROR2Q01974 943 aaKnown RBP16.07■□□□□ 0.16
COL9A2-205ENST00000461118 POU3F1Q03052 451 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-205ENST00000461118 HIKESHIQ53FT3 197 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 HMBOX1Q6NT76 420 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 ANKRD16Q6P6B7 361 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 CBLL1Q75N03 491 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 C20orf196Q8IYI0 205 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 LRRC17Q8N6Y2 441 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 KBTBD8Q8NFY9 601 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 LIPHQ8WWY8 451 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 TXNDC15Q96J42 360 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 LRRC37BQ96QE4 947 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 KCTD14Q9BQ13 255 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-205ENST00000461118 GPR35Q9HC97 309 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 SPAG4Q9NPE6 437 aa16.07■□□□□ 0.16
COL9A2-205ENST00000461118 A4GNTQ9UNA3 340 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms