RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SRPX2O60687 465 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 RGS9O75916 674 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 HLA-DQB1P01920 261 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ZGLP1P0C6A0 271 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 PEPDP12955 493 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 RAB3BP20337 219 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 HNRNPKP61978 463 aaKnown RBP eCLIP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 NIPAL3Q6P499 406 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 METAP1DQ6UB28 335 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 FAM198BQ6UWH4 519 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 PIGKQ92643 395 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 SCARF2Q96GP6 870 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 REG4Q9BYZ8 158 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 SLCO1C1Q9NYB5 712 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 FLRT3Q9NZU0 649 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF346Q9UL40 294 aaKnown RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 A0A0B4J203 849 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 A6NCN8 305 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 FAM74A7A6NL05 159 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 TNFSF14O43557 240 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 IKZF1Q13422 519 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 FAM74A3Q4VXF1 159 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 OVCH2Q7RTZ1 564 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 LILRB2Q8N423 598 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 NANPQ8TBE9 248 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 Q96M85 177 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 OR2M2Q96R28 347 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 STACQ99469 402 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 FGF20Q9NP95 211 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-203ENST00000460265 MYO15AQ9UKN7 3530 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 RAB19A4D1S5 217 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 GPR171O14626 319 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 IMPA2O14732 288 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 SBK2P0C263 348 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 DHPSP49366 369 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-203ENST00000460265 CCINQ13939 588 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 SERPINA12Q8IW75 414 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 RNF113BQ8IZP6 322 aaKnown RBP14.1□□□□□ -0.15
LMNB1-203ENST00000460265 TCTN2Q96GX1 697 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 PRSS27Q9BQR3 290 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 SLC25A18Q9H1K4 315 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 SIGLEC7Q9Y286 467 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 MPDZO75970 2070 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 SERINC4A6NH21 518 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 KDM4EB2RXH2 506 aaPredicted RBP14.1□□□□□ -0.15
LMNB1-203ENST00000460265 MCIDASD6RGH6 385 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 MAGEB1P43366 347 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 SRP9P49458 86 aaKnown RBP14.1□□□□□ -0.15
LMNB1-203ENST00000460265 TDGQ13569 410 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 PDSS1Q5T2R2 415 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF454Q8N9F8 522 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF527Q8NB42 609 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 OR5T2Q8NGG2 359 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 OR6N2Q8NGY6 317 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 DDOQ99489 341 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 CACNG6Q9BXT2 260 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 DLL4Q9NR61 685 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 ASB6Q9NWX5 421 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 COPS7AQ9UBW8 275 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 PRODH2Q9UF12 536 aa14.1□□□□□ -0.15
LMNB1-203ENST00000460265 A0A087WV62 115 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF217O75362 1048 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 OPN1LWP04000 364 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 S100A9P06702 114 aaKnown RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 TFPIP10646 304 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 POU3F2P20265 443 aaPredicted RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 GIFP27352 417 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 GPR143P51810 404 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 UBE2IP63279 158 aaKnown RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 ARHGAP11AQ6P4F7 1023 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 TDHQ8IZJ6 230 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 BCORP1Q8N888 145 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 LRRC46Q96FV0 321 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 CUTCQ9NTM9 273 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 FANCMQ8IYD8 2048 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 HEATR5AQ86XA9 2040 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 LANCL1O43813 399 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SELENOFO60613 162 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 IGKV1D-16P01601 117 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 DRD5P21918 477 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 ARFIP1P53367 373 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 CBLN3Q6UW01 205 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 ESPNLQ6ZVH7 1005 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 FAM220AQ7Z4H9 259 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF321PQ8N8H1 164 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 KCNJ15Q99712 375 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 IER2Q9BTL4 223 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 NXF5Q9H1B4 397 aaKnown RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 CMC2Q9NRP2 79 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 GRHPRQ9UBQ7 328 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 XKRYO14609 159 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 TGM6O95932 706 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 TCRBP04435 133 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 HOXC4P09017 264 aaPredicted RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SMIM10L1P0DMW3 83 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 CLDN12P56749 244 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 HYAL4Q2M3T9 481 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 RPL13AP3Q6NVV1 102 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms