RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 POU3F1Q03052 451 aaPredicted RBP19.77■□□□□ 0.76
PTPN4-207ENST00000460162 RBBP4Q09028 425 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 RUNDC3AQ59EK9 446 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 DPP10Q8N608 796 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 SPATA3Q8NHX4 192 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 ZNF837Q96EG3 531 aaPredicted RBP19.77■□□□□ 0.76
PTPN4-207ENST00000460162 PIMREGQ9BSJ6 248 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 PLK3Q9H4B4 646 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 MRPL39Q9NYK5 338 aaKnown RBP19.77■□□□□ 0.76
PTPN4-207ENST00000460162 CDC42EP3Q9UKI2 254 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 USP22Q9UPT9 525 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 NOX1Q9Y5S8 564 aa19.77■□□□□ 0.76
PTPN4-207ENST00000460162 HMGB1P1B2RPK0 211 aaPredicted RBP19.76■□□□□ 0.75
PTPN4-207ENST00000460162 TPST2O60704 377 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 HPRP00739 348 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 CELA3BP08861 270 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 PUDPQ08623 228 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 CYP51A1Q16850 503 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF613Q6PF04 617 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 VHLLQ6RSH7 139 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 MYPOPQ86VE0 399 aaPredicted RBP19.76■□□□□ 0.75
PTPN4-207ENST00000460162 PTOV1Q86YD1 416 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 C20orf196Q8IYI0 205 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 LRR1Q96L50 414 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF385DQ9H6B1 395 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 B3GAT2Q9NPZ5 323 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 TRIM33Q9UPN9 1127 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 NDUFAF1Q9Y375 327 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 CUBNO60494 3623 aa19.76■□□□□ 0.75
PTPN4-207ENST00000460162 RTTNQ86VV8 2226 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF503-AS2A6NEH8 195 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 MS4A18H0YCH9 400 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 M0R3G1 203 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 ANGPT2O15123 496 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF16P17020 682 aaPredicted RBP19.75■□□□□ 0.75
PTPN4-207ENST00000460162 CDH12P55289 794 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 NPRL3Q12980 569 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 MS4A18Q3C1V0 323 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 SMYD1Q8NB12 490 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 MAGEB18Q96M61 343 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 ANKRD27Q96NW4 1050 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 MOGAT1Q96PD6 335 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 ARHGDIGQ99819 225 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 VRK1Q99986 396 aaPredicted RBP19.75■□□□□ 0.75
PTPN4-207ENST00000460162 WFDC6Q9BQY6 131 aa19.75■□□□□ 0.75
PTPN4-207ENST00000460162 IGHV2OR16-5A0A0B4J2B6 119 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 LOC390937A0A1W2PQ73 354 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 M0R3H8 397 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 CHP2O43745 196 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 SEC14L2O76054 403 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 MT-ATP6P00846 226 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 C8BP07358 591 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 FAM157CP0CG43 387 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 IGHV4-31P0DP07 118 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 HLA-DOBP13765 273 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 NR4A2P43354 598 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 CAPZA2P47755 286 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 MTPNP58546 118 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 LSM11P83369 360 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPN4-207ENST00000460162 HGFACQ04756 655 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 PMS2P3Q13401 168 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 PHYHD1Q5SRE7 291 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 CYB5R2Q6BCY4 276 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 ZNF627Q7L945 461 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 MDP1Q86V88 176 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 SNX32Q86XE0 403 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 SLC30A8Q8IWU4 369 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 ANKS4BQ8N8V4 417 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 IL17RDQ8NFM7 739 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 TSPEARQ8WU66 669 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 CKAP2Q8WWK9 683 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 CGREF1Q99674 301 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 MCHR1Q99705 422 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 SIKE1Q9BRV8 207 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 MED29Q9NX70 200 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 LPAR3Q9UBY5 353 aa19.74■□□□□ 0.75
PTPN4-207ENST00000460162 STAB1Q9NY15 2570 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 VSTM5A8MXK1 200 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 NPR2P20594 1047 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 GZMKP49863 264 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 GGTLC2Q14390 218 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 CARD17Q5XLA6 110 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 PXKQ7Z7A4 578 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 RETREG3Q86VR2 466 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 C10orf53Q8N6V4 93 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 KCNK17Q96T54 332 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 EMC6Q9BV81 110 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 RAB1BQ9H0U4 201 aa19.73■□□□□ 0.75
PTPN4-207ENST00000460162 FBN3Q75N90 2809 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 SLC35F4A4IF30 521 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 hCG_2039718K7EN88 272 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 OPN1SWP03999 348 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 ERCC1P07992 297 aaPredicted RBP19.72■□□□□ 0.75
PTPN4-207ENST00000460162 THBS4P35443 961 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 DUSP7Q16829 419 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 GSG1Q2KHT4 349 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.72■□□□□ 0.755e-6■■■■□ 22.8
PTPN4-207ENST00000460162 NHLRC1Q6VVB1 395 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 LINC00114Q6XXX2 140 aa19.72■□□□□ 0.75
PTPN4-207ENST00000460162 PATL1Q86TB9 770 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms