RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 KIR2DS5A0A0G2JLQ3 304 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 A0A0G2JNG1 304 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 KIR2DS3K7RE56 304 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 AQP9O43315 295 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 MMP2P08253 660 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 CD46P15529 392 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 SSR4P51571 173 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 CARD18P57730 90 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 KIR2DS5Q14953 304 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 OPCMLQ14982 345 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 OR2B11Q5JQS5 317 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 RPL22L1Q6P5R6 122 aaKnown RBP18.18■□□□□ 0.5
SNX27-204ENST00000458013 CDCP1Q9H5V8 836 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 APEX1P27695 318 aaKnown RBP18.18■□□□□ 0.5
SNX27-204ENST00000458013 MAVSQ7Z434 540 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 RDH10Q8IZV5 341 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 NRIP3Q9NQ35 241 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 PPP3CBP16298 524 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 ALKBH6Q3KRA9 238 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 YOD1Q5VVQ6 348 aaPredicted RBP18.18■□□□□ 0.5
SNX27-204ENST00000458013 GDF7Q7Z4P5 450 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 CMIPQ8IY22 773 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 FAM185AQ8N0U4 392 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 FRMD1Q8N878 549 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 MUCL1Q96DR8 90 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 NIPAL2Q9H841 368 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 GJA4P35212 333 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 SLC1A3P43003 542 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 HRASLS5Q96KN8 279 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 GPR78Q96P69 363 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 SEMA4GQ9NTN9 838 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 SDHAF2Q9NX18 166 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 DEFA4P12838 97 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 DMRTC1Q5HYR2 192 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 C17orf99Q6UX52 265 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 SYT13Q7L8C5 426 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 ASB17Q8WXJ9 295 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 TEX37Q96LM6 180 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 TGIF2Q9GZN2 237 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 STEAP1Q9UHE8 339 aa18.18■□□□□ 0.5
SNX27-204ENST00000458013 SERINC4A6NH21 518 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 NXPH2O95156 264 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 BCL6P41182 706 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 MBOAT2Q6ZWT7 520 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 CNOT2Q9NZN8 540 aaKnown RBP18.17■□□□□ 0.5
SNX27-204ENST00000458013 BOKQ9UMX3 212 aaPredicted RBP18.17■□□□□ 0.5
SNX27-204ENST00000458013 NENFQ9UMX5 172 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 DCAF12Q5T6F0 453 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 K7ESM1 405 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 HBMQ6B0K9 141 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 FAM103A1Q9BTL3 118 aaKnown RBP18.17■□□□□ 0.5
SNX27-204ENST00000458013 PLK3Q9H4B4 646 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 GLI4P10075 376 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 ELAVL4P26378 380 aaKnown RBP18.17■□□□□ 0.5
SNX27-204ENST00000458013 TSPAN31Q12999 210 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 RBMS2Q15434 407 aaKnown RBP18.17■□□□□ 0.5
SNX27-204ENST00000458013 ADIRFQ15847 76 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 DCXRQ7Z4W1 244 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 ADAMTS14Q8WXS8 1223 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 TM4SF18Q96CE8 201 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 TMEM202A6NGA9 273 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 ANKRD61A6NGH8 418 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 FAM166BA8MTA8 275 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 AKR7A3O95154 331 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 PIGAP37287 484 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 FOXK2Q01167 660 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 HTR4Q13639 388 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 KHDC1LQ5JSQ8 128 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 SSX9Q7RTT3 188 aa18.17■□□□□ 0.5
SNX27-204ENST00000458013 STMND1H3BQB6 276 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 EIF3FO00303 357 aaPredicted RBP18.16■□□□□ 0.5
SNX27-204ENST00000458013 ARNTLO00327 626 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 ZNF728P0DKX0 622 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 PCBD1P61457 104 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 RUNX2Q13950 521 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 ESCO2Q56NI9 601 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 MANEAQ5SRI9 462 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 MKRN2Q9H000 416 aaKnown RBP18.16■□□□□ 0.5
SNX27-204ENST00000458013 CACNA1FO60840 1977 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 CER1O95813 267 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 SEMA3BQ13214 749 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 CRMP1Q14194 572 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 RETREG3Q86VR2 466 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 TERB2Q8NHR7 220 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 TMEM106AQ96A25 262 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 C11orf54Q9H0W9 315 aaPredicted RBP18.16■□□□□ 0.5
SNX27-204ENST00000458013 GPR173Q9NS66 373 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 C17orf112F2Z3M2 114 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 HLA-DOBP13765 273 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 CAMK2BQ13554 666 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 FCN2Q15485 313 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 HACD4Q5VWC8 232 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 LILRA2Q8N149 483 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 C2CD4CQ8TF44 421 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 PRSS16Q9NQE7 514 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 TOR1AO14656 332 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 P2RX6O15547 441 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 BCKDHBP21953 392 aa18.16■□□□□ 0.5
SNX27-204ENST00000458013 F2RL1P55085 397 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms