RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 GRPRP30550 384 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CD80P33681 288 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 PNPLA4P41247 253 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 LHX1P48742 406 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 PSMA6P60900 246 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 RAB14P61106 215 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ACSM1Q08AH1 577 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ATPAF1Q5TC12 328 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 RNF219Q5W0B1 726 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR2A2Q6IF42 318 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR52W1Q6IF63 320 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM220Q6QAJ8 160 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 HSD11B1LQ7Z5J1 315 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 MRPL10Q7Z7H8 261 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 LINC00471Q8N535 108 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR51D1Q8NGF3 324 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SNX33Q8WV41 574 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SECTM1Q8WVN6 248 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ASZ1Q8WWH4 475 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SLAMF9Q96A28 289 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 MVB12AQ96EY5 273 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC6A15Q9H2J7 730 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR51I1Q9H343 314 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 KLHL31Q9H511 634 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 BRD9Q9H8M2 597 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CAPN10Q9HC96 672 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 HMX1Q9NP08 348 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SIDT1Q9NXL6 827 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 PTTG3PQ9NZH4 202 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 STEAP1Q9UHE8 339 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 APCP25054 2843 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 FAM170BA6NMN3 283 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 M0QYG6 137 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 GRM6O15303 877 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 RAMP1O60894 148 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 NAA10P41227 235 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 FRKP42685 505 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 DCAF4L1Q3SXM0 396 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TGIF2LXQ8IUE1 241 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR1J2Q8NGS2 313 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR5W2Q8NH69 310 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TM4SF18Q96CE8 201 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ULBP3Q9BZM4 244 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF703Q9H7S9 590 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SGK2Q9HBY8 427 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM100Q9NV29 134 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 B4GALT6Q9UBX8 382 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF69Q9UC07 566 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CHRNA9Q9UGM1 479 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 PLAGL1Q9UM63 463 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TNFSF18Q9UNG2 199 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ICKQ9UPZ9 632 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ANGPT4Q9Y264 503 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 EXOGQ9Y2C4 368 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 GSTK1Q9Y2Q3 226 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 NPFFR2Q9Y5X5 522 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CUL9Q8IWT3 2517 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CHD8Q9HCK8 2581 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TRAV27A0A087WT01 109 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A1B0GTQ1 180 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 FEZF1A0PJY2 475 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 BCAT2O15382 392 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OAZ2O95190 189 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 NME1P15531 152 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC2A5P22732 501 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 HOXA6P31267 233 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CD70P32970 193 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 BSGP35613 385 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SOX2P48431 317 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 DLX5P56178 289 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SLBPQ14493 270 aaKnown RBP eCLIP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ODF4Q2M2E3 257 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TCTN1Q2MV58 587 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 PTCRAQ6ISU1 281 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 VN1R2Q8NFZ6 395 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR10H4Q8NGA5 316 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 OR13C2Q8NGS9 318 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 TEX47Q8TBZ9 253 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 GPBAR1Q8TDU6 330 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 SETD7Q8WTS6 366 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CMBLQ96DG6 245 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 C14orf79Q96F83 325 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ISYNA1Q9NPH2 558 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ZCCHC3Q9NUD5 404 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 DCAF16Q9NXF7 216 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 NCDNQ9UBB6 729 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF629Q9UEG4 869 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ZDHHC8Q9ULC8 765 aa4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 CARHSP1Q9Y2V2 147 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-202ENST00000456315 ADAMTS9Q9P2N4 1935 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A0G2JPF8 293 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 METTL21EPA6NDL7 271 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 HNRNPCL3B7ZW38 293 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 MBTPS2O43462 519 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 LMX1BO60663 402 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 CXCL1P09341 107 aa4.12□□□□□ -1.75
DEPDC1-202ENST00000456315 FBP1P09467 338 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms