RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 BAGE2Q86Y30 109 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR4N4Q8N0Y3 316 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NUP43Q8NFH3 380 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 FGF14Q92915 247 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 FAM122AQ96E09 287 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 CABLES2Q9BTV7 478 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ACTL7AQ9Y615 435 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 USP9XQ93008 2570 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NLRC5Q86WI3 1866 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF891A8MT65 544 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MT-ND6P03923 174 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 HEXAP06865 529 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 KLK1P06870 262 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 AADACP22760 399 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ITGB7P26010 798 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RAB7AP51149 207 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 C21orf58P58505 322 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SLC35A1P78382 337 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OPCMLQ14982 345 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NKAIN1Q4KMZ8 207 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 C12orf54Q6X4T0 127 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SMIM19Q96E16 107 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 WDR76Q9H967 626 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MMP26Q9NRE1 261 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 DUXBA0A1W2PPF3 345 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 IGLON5A6NGN9 336 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TRHRP34981 398 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MSX2P35548 267 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ACY1Q03154 408 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OTOP2Q7RTS6 562 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR5M8Q8NGP6 311 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SMIM4Q8WVI0 70 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ATG101Q9BSB4 218 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MANBALQ9NQG1 85 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MUC6Q6W4X9 2439 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 FOXD2O60548 495 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SIX6O95475 246 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 CSNK1A1P48729 337 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RAB9AP51151 201 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 HNRNPKP61978 463 aaKnown RBP eCLIP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RPL24P83731 157 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SLC36A2Q495M3 483 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR4N2Q8NGD1 307 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 VPS25Q9BRG1 176 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SOX7Q9BT81 388 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 EBPLQ9BY08 206 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ACTR3CQ9C0K3 210 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ANKRD30BLA7E2S9 258 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 GRXCR1A8MXD5 290 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 RPA2P15927 270 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 FUT4P22083 530 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 GIFP27352 417 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 GABRR2P28476 465 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 NBPF12Q5TAG4 269 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 DBX2Q6ZNG2 339 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TAC4Q86UU9 113 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF679Q8IYX0 411 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 GPR137CQ8N3F9 429 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TEX19Q8NA77 164 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SIDT2Q8NBJ9 832 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR51Q1Q8NH59 317 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 GPR45Q9Y5Y3 372 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ACANP16112 2415 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PLSCR5A0PG75 271 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SIRPAP78324 504 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF85Q03923 595 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 EMX1Q04741 257 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PLCXD2Q0VAA5 305 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 UGCGQ16739 394 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ABHD6Q9BV23 337 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZBTB20Q9HC78 741 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 POLLQ9UGP5 575 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ADAMTS6Q9UKP5 1117 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 A0A0U1RQF3 1178 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 HNF1AP20823 631 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PSMB6P28072 239 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CTBSQ01459 385 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR52W1Q6IF63 320 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 FBXL22Q6P050 247 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CBLL1Q75N03 491 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MEPCEQ7L2J0 689 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 FAM58AQ8N1B3 248 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZDHHC22Q8N966 263 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 BPIFCQ8NFQ6 507 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MVB12AQ96EY5 273 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 RBM14Q96PK6 669 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SHARPINQ9H0F6 387 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 KCNK12Q9HB15 430 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 REV1Q9UBZ9 1251 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR52A1Q9UKL2 312 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 BOKQ9UMX3 212 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 A0A0G2JLL6 359 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 BLOC1S5-TXNDC5H3BN57 136 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SERPINA7P05543 415 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OMGP23515 440 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PRAMEF18Q5VWM3 479 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PRRT2Q7Z6L0 340 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CASTOR1Q8WTX7 329 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PP6455Q8WZ26 134 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms