RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PXKQ7Z7A4 578 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 CARM1Q86X55 608 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 POM121Q96HA1 1249 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 KCNS3Q9BQ31 491 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 EMC6Q9BV81 110 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 BARX1Q9HBU1 254 aaPredicted RBP18.52■□□□□ 0.56
HMGB3-205ENST00000455596 MOV10Q9HCE1 1003 aaKnown RBP18.52■□□□□ 0.56
HMGB3-205ENST00000455596 MED29Q9NX70 200 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 ARMCX1Q9P291 453 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 GDF2Q9UK05 429 aaPredicted RBP18.52■□□□□ 0.56
HMGB3-205ENST00000455596 MOKQ9UQ07 419 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 SH3GLB1Q9Y371 365 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 CR1P17927 2039 aa18.52■□□□□ 0.55
HMGB3-205ENST00000455596 IGHV1-18A0A0C4DH31 117 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 ATP6V1G2-DDX39BF2Z307 99 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 M0R3G1 203 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 OR6A2O95222 327 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 IGHV4-39P01824 125 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 ADORA3P0DMS8 318 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 HOXB4P17483 251 aaPredicted RBP18.51■□□□□ 0.55
HMGB3-205ENST00000455596 TUBA1BP68363 451 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 TUBA4AP68366 448 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 TNK1Q13470 666 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 ZNF74Q16587 644 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 C3orf36Q3SXR2 165 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 CARD17Q5XLA6 110 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 TUBA1AQ71U36 451 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 TSPYL5Q86VY4 417 aaPredicted RBP18.51■□□□□ 0.55
HMGB3-205ENST00000455596 C20orf196Q8IYI0 205 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 POU5F2Q8N7G0 328 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 RP9Q8TA86 221 aaKnown RBP18.51■□□□□ 0.55
HMGB3-205ENST00000455596 RCN3Q96D15 328 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 TXNDC15Q96J42 360 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 LRR1Q96L50 414 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 ADAD1Q96M93 576 aaKnown RBP18.51■□□□□ 0.55
HMGB3-205ENST00000455596 CACNG6Q9BXT2 260 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 SLC19A3Q9BZV2 496 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 B3GAT2Q9NPZ5 323 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 NANSQ9NR45 359 aa18.51■□□□□ 0.55
HMGB3-205ENST00000455596 CRNNQ9UBG3 495 aaPredicted RBP18.51■□□□□ 0.55
HMGB3-205ENST00000455596 MTORP42345 2549 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 SLC35F4A4IF30 521 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 ZNF726A6NNF4 738 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 ZNF99A8MXY4 864 aaPredicted RBP18.5■□□□□ 0.55
HMGB3-205ENST00000455596 C11orf98E9PRG8 122 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 KPNA4O00629 521 aaPredicted RBP18.5■□□□□ 0.55
HMGB3-205ENST00000455596 CCDC22O60826 627 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 NDUFS7O75251 213 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 CH25HO95992 272 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 APOBEC3AP31941 199 aaPredicted RBP18.5■□□□□ 0.55
HMGB3-205ENST00000455596 ACVR1BP36896 505 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 PHYHD1Q5SRE7 291 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 OR2T12Q8NG77 320 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 ZNF837Q96EG3 531 aaPredicted RBP18.5■□□□□ 0.55
HMGB3-205ENST00000455596 ZNF426Q9BUY5 554 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 KATNB1Q9BVA0 655 aa18.5■□□□□ 0.55
HMGB3-205ENST00000455596 ATP8B1O43520 1251 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 SERPINI2O75830 405 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 CRYAAP02489 173 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 TNFRSF1BP20333 461 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 TAS2R41P59536 307 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 CAMK2DQ13557 499 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 LRRC23Q53EV4 343 aaPredicted RBP18.49■□□□□ 0.55
HMGB3-205ENST00000455596 NHLRC1Q6VVB1 395 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 DEF8Q6ZN54 512 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 ARPINQ7Z6K5 226 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 FAM169BQ8N8A8 192 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 PRSS27Q9BQR3 290 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 POLR2J2Q9GZM3 115 aaKnown RBP18.49■□□□□ 0.55
HMGB3-205ENST00000455596 POLR2J3Q9H1A7 115 aaKnown RBP18.49■□□□□ 0.55
HMGB3-205ENST00000455596 ZNF229Q9UJW7 825 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 AP3M1Q9Y2T2 418 aa18.49■□□□□ 0.55
HMGB3-205ENST00000455596 SETD2Q9BYW2 2564 aaPredicted RBP18.48■□□□□ 0.55
HMGB3-205ENST00000455596 ALPK2Q86TB3 2170 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 IGKV3-15P01624 115 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 IGLV1-44P01699 117 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 HIST1H2ABP04908 130 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 CECR9P0C854 216 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 UMPSP11172 480 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 KDELR2P33947 212 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 CHRNB3Q05901 458 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 ZP4Q12836 540 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 HIST3H2AQ7L7L0 130 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 CCDC36Q8IYA8 594 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 MICU2Q8IYU8 434 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 OR6N1Q8NGY5 312 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 HIST1H2ACQ93077 130 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 TAS2R5Q9NYW4 299 aa18.48■□□□□ 0.55
HMGB3-205ENST00000455596 ARFGEF3Q5TH69 2177 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 ELOVL7A1L3X0 281 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 SSX4O60224 188 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 SHOX2O60902 331 aaPredicted RBP18.47■□□□□ 0.55
HMGB3-205ENST00000455596 ASAH2BP0C7U1 165 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 BMP4P12644 408 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 COX4I1P13073 169 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 IFNGR1P15260 489 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 CBR1P16152 277 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 OR1E2P47887 323 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 BIDP55957 195 aa18.47■□□□□ 0.55
HMGB3-205ENST00000455596 NAAAQ02083 359 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms