RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PRKCDQ05655 676 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 RPL18Q07020 188 aaKnown RBP12.44□□□□□ -0.42
HDAC4-205ENST00000454542 C1DQ13901 141 aaKnown RBP12.44□□□□□ -0.42
HDAC4-205ENST00000454542 PPA1Q15181 289 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 MBOAT2Q6ZWT7 520 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 CYP4Z1Q86W10 505 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 WFDC8Q8IUA0 241 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 NRMQ8IXM6 262 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 RNF113BQ8IZP6 322 aaKnown RBP12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SLC7A13Q8TCU3 470 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 NINJ1Q92982 152 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SLC7A6OSQ96CW6 309 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-205ENST00000454542 PIK3IP1Q96FE7 263 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 LRR1Q96L50 414 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SEPHS2Q99611 448 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SLC17A5Q9NRA2 495 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 MED29Q9NX70 200 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 RHCGQ9UBD6 479 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 hCG_2039718K7EN88 272 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 PDE5AO76074 875 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 H1F0P07305 194 aaKnown RBP12.43□□□□□ -0.42
HDAC4-205ENST00000454542 FUT1P19526 365 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 MAKP20794 623 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 TGFBR3Q03167 851 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 FHL1Q13642 323 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
HDAC4-205ENST00000454542 STK11Q15831 433 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 NCMAPQ5T1S8 102 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 WDR31Q8NA23 367 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 OR6X1Q8NH79 312 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 MAGEE2Q8TD90 523 aaPredicted RBP12.43□□□□□ -0.42
HDAC4-205ENST00000454542 NRGNQ92686 78 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 BPIFA2Q96DR5 249 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 ASB9Q96DX5 294 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 PLPPR2Q96GM1 343 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 TXNDC15Q96J42 360 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 ADAD1Q96M93 576 aaKnown RBP12.43□□□□□ -0.42
HDAC4-205ENST00000454542 PIP5K1AQ99755 562 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 IL1RAPQ9NPH3 570 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 ST6GALNAC2Q9UJ37 374 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 AMDHD2Q9Y303 409 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 V9GYQ6 96 aa12.43□□□□□ -0.42
HDAC4-205ENST00000454542 ARPC4-TTLL3A0A0A6YYG9 625 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 IGHMP01871 453 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 UMPSP11172 480 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 IFI30P13284 250 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 IFNGR1P15260 489 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 ITGA2P17301 1181 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 AHCYP23526 432 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 LIMS1P48059 325 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 SLC9A3P48764 834 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 MS4A2Q01362 244 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 IL1RL1Q01638 556 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
HDAC4-205ENST00000454542 ANKDD1AQ495B1 522 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 DNAL1Q4LDG9 190 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 C9orf135Q5VTT2 229 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 PGM2L1Q6PCE3 622 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 TMPRSS11FQ6ZWK6 438 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 SLC35D2Q76EJ3 337 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 PIWIL3Q7Z3Z3 882 aaKnown RBP12.42□□□□□ -0.42
HDAC4-205ENST00000454542 LRRC75AQ8NAA5 344 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 EMC6Q9BV81 110 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 LIME1Q9H400 295 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 NGBQ9NPG2 151 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 OBP2BQ9NPH6 170 aa12.42□□□□□ -0.42
HDAC4-205ENST00000454542 TRBV4-1A0A0J9YWV2 114 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 CENPBD1B2RD01 187 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 CDC42EP2O14613 210 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ACOT8O14734 319 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 RNF13O43567 381 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 DIRAS1O95057 198 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 OR6A2O95222 327 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ATE1O95260 518 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 HIST1H2ABP04908 130 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 FABP3P05413 133 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 PGA4P0DJD7 388 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 PGA3P0DJD8 388 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 AQP2P41181 271 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF133P52736 654 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-205ENST00000454542 BIDP55957 195 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 BNIP1Q12981 228 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 SEC23BQ15437 767 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 TBRG1Q3YBR2 411 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 FBXW10Q5XX13 1052 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ADAM5Q6NVV9 412 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 PODNL1Q6PEZ8 512 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF730Q6ZMV8 503 aa12.41□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF704Q6ZNC4 412 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-205ENST00000454542 HIST3H2AQ7L7L0 130 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms