RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MED29Q9NX70 200 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 TMEM5Q9Y2B1 443 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 CACNA1DQ01668 2161 aa24.67■■□□□ 1.54
SMARCC1-203ENST00000454240 TCRBV3S1A0A5B6 114 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 DHRS12A0PJE2 317 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 EFCAB9A8MZ26 197 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 LYZL6O75951 148 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 KRT36O76013 467 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 SAGP10523 405 aaPredicted RBP24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 PRF1P14222 555 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 OMPP47874 163 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 LIMS1P48059 325 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 FOXG1P55316 489 aaPredicted RBP24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 RPS4XP62701 263 aaKnown RBP24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 LGALS3BPQ08380 585 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 FHL1Q13642 323 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 LAPTM4AQ15012 233 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 DAZAP2Q15038 168 aaPredicted RBP24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 BHLHA15Q7RTS1 189 aaPredicted RBP24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 TMEM123Q8N131 208 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 ALPK1Q96QP1 1244 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 MED18Q9BUE0 208 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 EMC6Q9BV81 110 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 TAS2R16Q9NYV7 291 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 UNC79Q9P2D8 2635 aa24.66■■□□□ 1.54
SMARCC1-203ENST00000454240 SLC35F4A4IF30 521 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 CDC42EP2O14613 210 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 SLC43A1O75387 559 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 UPK3AO75631 287 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 SERPINI2O75830 405 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 ITGA5P08648 1049 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 IFNGR1P15260 489 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 IL32P24001 234 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 DNAJA1P31689 397 aaKnown RBP24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 GPR4P46093 362 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 SLC9A3P48764 834 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 ANKDD1AQ495B1 522 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 SLC35D2Q76EJ3 337 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 SPATA24Q86W54 205 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 WDFY1Q8IWB7 410 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 MOSPD2Q8NHP6 518 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 S100PBPQ96BU1 408 aa24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 FAM46AQ96IP4 442 aaKnown RBP24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 USB1Q9BQ65 265 aaKnown RBP24.65■■□□□ 1.54
SMARCC1-203ENST00000454240 F13BP05160 661 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 THBDP07204 575 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 HOXB6P17509 224 aaKnown RBP24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 MPGP29372 298 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 LINGO2Q7L985 606 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 ABHD12BQ7Z5M8 362 aaPredicted RBP24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 OAFQ86UD1 273 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 CHID1Q9BWS9 393 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 INIPQ9NRY2 104 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 AURKCQ9UQB9 309 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 LYVE1Q9Y5Y7 322 aa24.64■■□□□ 1.54
SMARCC1-203ENST00000454240 FAM221AA4D161 298 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 ZNF726A6NNF4 738 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 SSTR2P30874 369 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 BIDP55957 195 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 OR13C2Q8NGS9 318 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 OR51A7Q8NH64 312 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 OR6X1Q8NH79 312 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 LRR1Q96L50 414 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 ADAD1Q96M93 576 aaKnown RBP24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 TNFRSF13CQ96RJ3 184 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 KRCC1Q9NPI7 259 aaPredicted RBP24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 ZNF226Q9NYT6 803 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 TMCC3Q9ULS5 477 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 PRR14LQ5THK1 2151 aa24.63■■□□□ 1.53
SMARCC1-203ENST00000454240 TRAV27A0A087WT01 109 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 CLOCKO15516 846 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 KLF4O43474 513 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 KRT33AO76009 404 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 GABRA6Q16445 453 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 ALG10Q5BKT4 473 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 OR2T5Q6IEZ7 315 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 ZER1Q7Z7L7 766 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 C20orf196Q8IYI0 205 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 LRRC75AQ8NAA5 344 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 OR4C15Q8NGM1 316 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 OR2T29Q8NH02 315 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 MUS81Q96NY9 551 aa24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 ALKBH3Q96Q83 286 aaPredicted RBP24.62■■□□□ 1.53
SMARCC1-203ENST00000454240 A0A1W2PRG6 482 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 CIB4A0PJX0 185 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 NPIPB13A6NJU9 1138 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 A6NNC1 897 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 NPIPB4C9JG80 1138 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 ZNF587BE7ETH6 402 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 RPL36A-HNRNPH2H7BZ11 118 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 TNFRSF11BO00300 401 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 CASKO14936 926 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 BCL10O95999 233 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 CRYGSP22914 178 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 TLE4Q04727 773 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 CAMK2DQ13557 499 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 ZBED5Q49AG3 693 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 CARD17Q5XLA6 110 aa24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 PAPD5Q8NDF8 572 aaKnown RBP24.61■■□□□ 1.53
SMARCC1-203ENST00000454240 HSD17B8Q92506 261 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms