RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MS4A15Q8N5U1 240 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 ZNF417Q8TAU3 575 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 ZNF587Q96SQ5 575 aaPredicted RBP10.66□□□□□ -0.7
VTA1-203ENST00000452973 TMEM185BQ9H7F4 350 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 LAMP5Q9UJQ1 280 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 NUP210LQ5VU65 1888 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 ADAMTS20P59510 1910 aa10.66□□□□□ -0.7
VTA1-203ENST00000452973 B4DXG7 233 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 RFX2P48378 723 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 INPP1P49441 399 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 NANOS3P60323 173 aaKnown RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.65□□□□□ -0.7
VTA1-203ENST00000452973 BTBD16Q32M84 506 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 RNASE12Q5GAN4 147 aaKnown RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 GRINAQ7Z429 371 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 ZNF433Q8N7K0 673 aaPredicted RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 C19orf18Q8NEA5 215 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 OR5M1Q8NGP8 315 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 OR2T4Q8NH00 348 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 WDR77Q9BQA1 342 aaPredicted RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 PTDSS2Q9BVG9 487 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 SLC25A18Q9H1K4 315 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 MRPS7Q9Y2R9 242 aaKnown RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 A0A0G2JMP0 313 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 A0A0X1KG70 313 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 A8MVM7 634 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 AKR7A3O95154 331 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 AHSA1O95433 338 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 CELA2AP08217 269 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 HLA-DOBP13765 273 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 RAB3BP20337 219 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 HOXA6P31267 233 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 CD97P48960 835 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 ETFDHQ16134 617 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 HBMQ6B0K9 141 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 LRRC69Q6ZNQ3 347 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 SLC35D2Q76EJ3 337 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 GDPD1Q8N9F7 314 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 OR4M2Q8NGB6 313 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 OR10G3Q8NGC4 313 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 LIPHQ8WWY8 451 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 MR1Q95460 341 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 C11orf54Q9H0W9 315 aaPredicted RBP10.65□□□□□ -0.7
VTA1-203ENST00000452973 INIPQ9NRY2 104 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 GTF2A1LQ9UNN4 478 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 HRH3Q9Y5N1 445 aa10.65□□□□□ -0.7
VTA1-203ENST00000452973 TMEM200CA6NKL6 621 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 SLC16A7O60669 478 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 EIF4EP06730 217 aaKnown RBP10.65□□□□□ -0.71
VTA1-203ENST00000452973 TDGF1P13385 188 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 CCKBRP32239 447 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 SOX2P48431 317 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 SLC26A5P58743 744 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 OR7A5Q15622 319 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 RPL22L1Q6P5R6 122 aaKnown RBP10.65□□□□□ -0.71
VTA1-203ENST00000452973 GLCCI1Q86VQ1 547 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 SYS1Q8N2H4 156 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 FAM181AQ8N9Y4 354 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 SEMA4CQ9C0C4 833 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 METTL7AQ9H8H3 244 aa10.65□□□□□ -0.71
VTA1-203ENST00000452973 RALGAPA1Q6GYQ0 2036 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 MASP2O00187 686 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 ZFPL1O95159 310 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 SNRPBP14678 240 aaKnown RBP10.64□□□□□ -0.71
VTA1-203ENST00000452973 GALP22466 123 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 LCN1P31025 176 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 OR2B6P58173 313 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 C17orf67Q0P5P2 114 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 TRAM1Q15629 374 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 ISXQ2M1V0 245 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 LIPNQ5VXI9 398 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 SLC16A9Q7RTY1 509 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 FAM220AQ7Z4H9 259 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 TRMT10AQ8TBZ6 339 aaKnown RBP10.64□□□□□ -0.71
VTA1-203ENST00000452973 OIT3Q8WWZ8 545 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 DEFB126Q9BYW3 111 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 NDEL1Q9GZM8 345 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 HDHD2Q9H0R4 259 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 PRMT8Q9NR22 394 aaPredicted RBP10.64□□□□□ -0.71
VTA1-203ENST00000452973 D6RAR5 112 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 OGG1O15527 345 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 SQSTM1Q13501 440 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 EFR3AQ14156 821 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 MEP1BQ16820 701 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 PRAMEF20Q5VT98 475 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 ZNF385CQ66K41 422 aaPredicted RBP10.64□□□□□ -0.71
VTA1-203ENST00000452973 ZNF57Q68EA5 555 aaPredicted RBP10.64□□□□□ -0.71
VTA1-203ENST00000452973 ASB18Q6ZVZ8 466 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 RDH10Q8IZV5 341 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 WACQ9BTA9 647 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 ULBP3Q9BZM4 244 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 PPP1R3EQ9H7J1 279 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 NOX4Q9NPH5 578 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 BRD7Q9NPI1 651 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 MYOTQ9UBF9 498 aa10.64□□□□□ -0.71
VTA1-203ENST00000452973 GPN3Q9UHW5 284 aaPredicted RBP10.64□□□□□ -0.71
VTA1-203ENST00000452973 HTR3EA5X5Y0 456 aa10.63□□□□□ -0.71
VTA1-203ENST00000452973 RAD1O60671 282 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms