RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 YKT6O15498 198 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 PHF1O43189 567 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 NMT2O60551 498 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 FCN3O75636 299 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 VENTXO95231 258 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 GJB5O95377 273 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 LALBAP00709 142 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 PRKACBP22694 351 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 SHMT2P34897 504 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 HSD17B2P37059 387 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 CX3CR1P49238 355 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 FBXW4P57775 412 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 CHRNB3Q05901 458 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 STK38Q15208 465 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 FAM83EQ2M2I3 478 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 NSUN5P1Q3KNT7 163 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 HIGD2BQ4VC39 106 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 H3F3CQ6NXT2 135 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 HIPK1Q86Z02 1210 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 NRMQ8IXM6 262 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF100Q8IYN0 542 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 CMTM8Q8IZV2 173 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 FAM58AQ8N1B3 248 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 ASCC1Q8N9N2 400 aaKnown RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 TMEM104Q8NE00 496 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF564Q8TBZ8 553 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 VN1R17PQ8TDU5 208 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 TFB1MQ8WVM0 346 aaKnown RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 MSANTD3Q96H12 275 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 HSFY1Q96LI6 401 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 C1orf147Q96MC9 270 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 TMEM246Q9BRR3 403 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 UCK2Q9BZX2 261 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 SLC7A5P2Q9GIP4 190 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 MFFQ9GZY8 342 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 RPS10P5Q9NQ39 176 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF581Q9P0T4 197 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 OR1A1Q9P1Q5 309 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 STOX2Q9P2F5 926 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 N6AMT1Q9Y5N5 214 aa3.86□□□□□ -1.79
HMGB1P26-201ENST00000452520 GON4LQ3T8J9 2241 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 TRAV9-2A0A087WT02 112 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF99A8MXY4 864 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 E9PAM4 449 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 LOC110117498-PIK3R3F6TDL0 507 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 M0R3G1 203 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 CCL21O00585 134 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 NDUFAB1O14561 156 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 CDX4O14627 284 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 POLR1CO15160 346 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF254O75437 659 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 ERLIN2O94905 339 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 FGGP02679 453 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 FGF1P05230 155 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 C2P06681 752 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 VDAC1P21796 283 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 RGRP47804 291 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 CCNG1P51959 295 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 CLDN18P56856 261 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 GPX6P59796 221 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 RPL32P62910 135 aaKnown RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 ERVK-25P63136 954 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 TRIM40Q6P9F5 258 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 CERS6Q6ZMG9 384 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 APOBEC3FQ8IUX4 373 aaKnown RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 SKA3Q8IX90 412 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 GPR65Q8IYL9 337 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 JAGN1Q8N5M9 183 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 TTC29Q8NA56 475 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 OR2A12Q8NGT7 310 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 PAGE5Q96GU1 130 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 SORT1Q99523 831 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 RNF126Q9BV68 326 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 RNF167Q9H6Y7 350 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 DYRK4Q9NR20 520 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 GIN1Q9NXP7 522 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 MMP17Q9ULZ9 603 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 CDHR2Q9BYE9 1310 aa3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 COL2A1P02458 1487 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P26-201ENST00000452520 IGLV3-22A0A075B6J6 115 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 IGKV1D-8A0A087WSZ0 117 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 A0A087WWV3 80 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 PRSS37A4D1T9 235 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 HSBP1L1C9JCN9 74 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 ZNF253O75346 499 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 CCNB2O95067 398 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 IFNW1P05000 195 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 GPM6AP51674 278 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 PLK1P53350 603 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 PSMD4P55036 377 aaKnown RBP3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 TLE4Q04727 773 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 CCDC173Q0VFZ6 552 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 SERTAD2Q14140 314 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 ARL6IP1Q15041 203 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 KRT71Q3SY84 523 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 PARP15Q460N3 678 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 OR5M10Q6IEU7 315 aa3.84□□□□□ -1.79
HMGB1P26-201ENST00000452520 ULK3Q6PHR2 472 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms