RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 COX15Q7KZN9 410 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 OR2T27Q8NH04 317 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 MARC2Q969Z3 335 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 GPR137Q96N19 417 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 LYSMD1Q96S90 227 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 GAS2L1Q99501 681 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-204ENST00000449510 TBL1XR1Q9BZK7 514 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 CHST6Q9GZX3 395 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 TAS2R8Q9NYW2 309 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 KCND3Q9UK17 655 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 FAM96BQ9Y3D0 163 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 LSM5Q9Y4Y9 91 aaKnown RBP11.4□□□□□ -0.58
UBE3B-204ENST00000449510 GVINP1Q7Z2Y8 2422 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-204ENST00000449510 SLC16A7O60669 478 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 KCNJ13O60928 360 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 TPPPO94811 219 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 TXNDC12O95881 172 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 ZP3P21754 424 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 SLC6A9P48067 706 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 NR2C2APQ86WQ0 139 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 OR13C3Q8NGS6 347 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 DGAT2Q96PD7 388 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 FAM83CQ9BQN1 747 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 CMC2Q9NRP2 79 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 MED17Q9NVC6 651 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 SCDO00767 359 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 SUSD5O60279 629 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 PAPLNO95428 1278 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 MPIG6BO95866 241 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 CSF1P09603 554 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 JMJD7P0C870 316 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 MMP15P51511 669 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 ACTBP60709 375 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 GPR85P60893 370 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 ACTG1P63261 375 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 EEF1A2Q05639 463 aaKnown RBP11.4□□□□□ -0.59
UBE3B-204ENST00000449510 CDK5R1Q15078 307 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 CAMKMTQ7Z624 323 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 OR1J4Q8NGS1 313 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 OR10Z1Q8NGY1 313 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 MS4A6EQ96DS6 147 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 MMABQ96EY8 250 aaPredicted RBP11.4□□□□□ -0.59
UBE3B-204ENST00000449510 INTS14Q96SY0 518 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 PELI2Q9HAT8 420 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 GMEB2Q9UKD1 530 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.59
UBE3B-204ENST00000449510 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.59
UBE3B-204ENST00000449510 A0A0A6YYC8 382 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ARRDC5A6NEK1 342 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 I3L1I5 382 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 MED6O75586 246 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ZFPL1O95159 310 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 S100A2P29034 98 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CD80P33681 288 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 DUSP2Q05923 314 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 RAB11FIP2Q7L804 512 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 GPAT4Q86UL3 456 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ADIPOR2Q86V24 386 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 OR5D18Q8NGL1 313 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 OR13C9Q8NGT0 318 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 NR4A3Q92570 626 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 DIO2Q92813 273 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SMARCD2Q92925 531 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 PFDN5Q99471 154 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 PHB2Q99623 299 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 PRSS16Q9NQE7 514 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 MBNL1Q9NR56 388 aaKnown RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 WDR87Q6ZQQ6 2873 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SLC22A23A1A5C7 686 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 TMEM229AB2RXF0 380 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 B4DGG1 531 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 PRSS44E7EML9 344 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CTRB1P17538 263 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 KCNJ3P48549 501 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ARRB1P49407 418 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SNRPNP63162 240 aaKnown RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CTRB2Q6GPI1 263 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 FRMD1Q8N878 549 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 FOXRED1Q96CU9 486 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SELENOIQ9C0D9 397 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SLC6A17Q9H1V8 727 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 DZANK1Q9NVP4 752 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF230Q9UIE0 474 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 HIDE1A8MVS5 230 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 NMBP08949 121 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF20P17024 532 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CCR2P41597 374 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 MAT1AQ00266 395 aaKnown RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SNTB1Q13884 538 aaKnown RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 Q499Y3 187 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms