RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CLCA1A8K7I4 914 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 IMPA2O14732 288 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 PRKYO43930 277 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 MPZL2O60487 215 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 CYTIPO60759 359 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 BCL10O95999 233 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 IGHMP01871 453 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 DAP3P51398 398 aaKnown RBP17.42■□□□□ 0.38
SGCE-207ENST00000447873 SLC17A1Q14916 467 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 POU4F3Q15319 338 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 EMC4Q5J8M3 183 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 ABLIM2Q6H8Q1 611 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 FGD2Q7Z6J4 655 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 MARVELD2Q8N4S9 558 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 OR4K13Q8NH42 304 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 ZPLD1Q8TCW7 415 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 RASD2Q96D21 266 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 CMC2Q9NRP2 79 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 ZNF226Q9NYT6 803 aa17.42■□□□□ 0.38
SGCE-207ENST00000447873 NPIPB13A6NJU9 1138 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 NPIPB4C9JG80 1138 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 TLX2O43763 284 aaPredicted RBP17.41■□□□□ 0.38
SGCE-207ENST00000447873 SLC2A10O95528 541 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 TXNDC12O95881 172 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 HIST1H1CP16403 213 aaKnown RBP17.41■□□□□ 0.38
SGCE-207ENST00000447873 ZNF3P17036 446 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 ACVR1BP36896 505 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 RASGEF1BQ0VAM2 473 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 MAD2L1BPQ15013 274 aaPredicted RBP17.41■□□□□ 0.38
SGCE-207ENST00000447873 EEF1A1P5Q5VTE0 462 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 ZNF585AQ6P3V2 769 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 PLXDC2Q6UX71 529 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 ARIH2OSQ8N7S6 290 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 OR9K2Q8NGE7 335 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 OR52E2Q8NGJ4 325 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 RNF128Q8TEB7 428 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 PNPLA3Q9NST1 481 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 MED29Q9NX70 200 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 AASSQ9UDR5 926 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 KLHL21Q9UJP4 597 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 GPR52Q9Y2T5 361 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 CACNA1BQ00975 2339 aa17.41■□□□□ 0.38
SGCE-207ENST00000447873 SLC22A20A6NK97 555 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 AHRRA9YTQ3 701 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 XKRYO14609 159 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 TRAF3IP2O43734 574 aaPredicted RBP17.4■□□□□ 0.38
SGCE-207ENST00000447873 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.4■□□□□ 0.38
SGCE-207ENST00000447873 CD47Q08722 323 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 KRR1Q13601 381 aaKnown RBP17.4■□□□□ 0.38
SGCE-207ENST00000447873 MELKQ14680 651 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 PDK3Q15120 406 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 SF3B4Q15427 424 aaKnown RBP eCLIP17.4■□□□□ 0.38
SGCE-207ENST00000447873 GFRALQ6UXV0 394 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 CREB3L2Q70SY1 520 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 JAZF1Q86VZ6 243 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 RHOXF1Q8NHV9 184 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ABHD3Q8WU67 409 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 TXNDC15Q96J42 360 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 UBAP1Q9NZ09 502 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 KLHL9Q9P2J3 617 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ZNF175Q9Y473 711 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ZNF716A6NP11 495 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 AQP8O94778 261 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 TPOP07202 933 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ABOP16442 354 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 BIDP55957 195 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 SNRPGP62308 76 aaKnown RBP17.4■□□□□ 0.38
SGCE-207ENST00000447873 EFNB1P98172 346 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ZNF362Q5T0B9 420 aaPredicted RBP17.4■□□□□ 0.38
SGCE-207ENST00000447873 ARMC4Q5T2S8 1044 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 FAM205BPQ63HN1 556 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 SDR9C7Q8NEX9 313 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 CNIH3Q8TBE1 160 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 TMEM163Q8TC26 289 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ASB10Q8WXI3 467 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 OTULINQ96BN8 352 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 TRIB1Q96RU8 372 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 PCDHGB5Q9Y5G0 923 aa17.4■□□□□ 0.38
SGCE-207ENST00000447873 ALPK2Q86TB3 2170 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 A6NIZ1 184 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 ARHGEF9O43307 516 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 FCGR2AP12318 317 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 GABRB1P18505 474 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 PAICSP22234 425 aaKnown RBP17.39■□□□□ 0.37
SGCE-207ENST00000447873 ACVR2AP27037 513 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 SLC16A1P53985 500 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 CLDN17P56750 224 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 RAP1BP61224 184 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 RAP1AP62834 184 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 NFATC3Q12968 1075 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 CDK5R2Q13319 367 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 RNPS1Q15287 305 aaKnown RBP17.39■□□□□ 0.37
SGCE-207ENST00000447873 MESTQ5EB52 335 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 GTF2IRD2BQ6EKJ0 949 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 LEG1Q6P5S2 330 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 NHLRC1Q6VVB1 395 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 HDDC2Q7Z4H3 204 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 P4HA3Q7Z4N8 544 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 ADGRE4PQ86SQ3 457 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 ADCK1Q86TW2 530 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms