RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ACP1P24666 158 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 HTR3AP46098 478 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 SIRPAP78324 504 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 PCOLCEQ15113 449 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR7A5Q15622 319 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 EMC4Q5J8M3 183 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 LINC01590Q5TEZ4 76 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 IL20RBQ6UXL0 311 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 MINDY2Q8NBR6 621 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR2T4Q8NH00 348 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF417Q8TAU3 575 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 TTC9Q92623 222 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 HTRA1Q92743 480 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 ARL5BQ96KC2 179 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF587Q96SQ5 575 aaPredicted RBP8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACOXLQ9NUZ1 547 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 R4GN57 208 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 IGHV1-45A0A0A0MS14 117 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 NPIPB7O75200 414 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ITGA10O75578 1167 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 KLF7O75840 302 aaPredicted RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 RPP14O95059 124 aaKnown RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 GP1BAP07359 652 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 NAGAP17050 411 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 EDNRAP25101 427 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ETV6P41212 452 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 RPS27P42677 84 aaKnown RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF41P51814 821 aaPredicted RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC25A1P53007 311 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 IL10RAQ13651 578 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 SF3B4Q15427 424 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACKR1Q16570 336 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 SGCBQ16585 318 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACSM3Q53FZ2 586 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 DCAF12Q5T6F0 453 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 IDNKQ5T6J7 187 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 DDI2Q5TDH0 399 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 PRAMEF20Q5VT98 475 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 GPR139Q6DWJ6 353 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 FAM198BQ6UWH4 519 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR5M1Q8NGP8 315 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 TIGARQ9NQ88 270 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 SDHAF3Q9NRP4 125 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 POU2F3Q9UKI9 436 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 POLHQ9Y253 713 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 FABP12A6NFH5 140 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 PLPP3O14495 311 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR2T1O43869 369 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 HPGDSO60760 199 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 TXNDC12O95881 172 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 TGM1P22735 817 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 APOBEC1P41238 236 aaKnown RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 GDI2P50395 445 aaKnown RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 FOXF1Q12946 379 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 SELENBP1Q13228 472 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 MELKQ14680 651 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 GLYR1Q49A26 553 aaPredicted RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 CDONQ4KMG0 1287 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 DMKNQ6E0U4 476 aaPredicted RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 LYPD8Q6UX82 237 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF248Q8NDW4 579 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 STK35Q8TDR2 534 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ELP5Q8TE02 316 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 THEM6Q8WUY1 208 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ST8SIA1Q92185 356 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 MRPL48Q96GC5 212 aaKnown RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 PGLYRP3Q96LB9 341 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 SDHCQ99643 169 aaPredicted RBP8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 PDCD1LG2Q9BQ51 273 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 MIXL1Q9H2W2 232 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMEM185BQ9H7F4 350 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 WDR76Q9H967 626 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ST6GALNAC2Q9UJ37 374 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 MOKQ9UQ07 419 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 LOXL2Q9Y4K0 774 aa8.6□□□□□ -1.03
COL6A4P1-201ENST00000446690 ISPDA4D126 451 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 PMS2P1A4D2B8 440 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 FLRT2O43155 660 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC16A7O60669 478 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 TMCC2O75069 709 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 STK17BO94768 372 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 DLGAP3O95886 979 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 HLA-DOBP13765 273 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 GALP22466 123 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 MYL9P24844 172 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 AVPR2P30518 371 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 FOLR3P41439 243 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 CASP3P42574 277 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 RPL27P61353 136 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 RPS18P62269 152 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 TRAM1Q15629 374 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 NDUFA5Q16718 116 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF528Q3MIS6 628 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC16A9Q7RTY1 509 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 SYS1Q8N2H4 156 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms