RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 PAX1P15863 534 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 ATP5J2P56134 94 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 SELENOWP63302 87 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 CAMK2DQ13557 499 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 CEACAM16Q2WEN9 425 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 ANKRD16Q6P6B7 361 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 B3GLCTQ6Y288 498 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 PXKQ7Z7A4 578 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 DEPDC4Q8N2C3 294 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 PIK3C3Q8NEB9 887 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 TMEM255BQ8WV15 326 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 RADILQ96JH8 1075 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 TRAF4Q9BUZ4 470 aaPredicted RBP12.89□□□□□ -0.35
USE1-202ENST00000445667 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 CRLF2Q9HC73 371 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 NANSQ9NR45 359 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
USE1-202ENST00000445667 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
USE1-202ENST00000445667 CADP27708 2225 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 ZNF726A6NNF4 738 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 CXCR6O00574 342 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 GSTA4O15217 222 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 TMCC2O75069 709 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 SEC14L2O76054 403 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 OR5F1O95221 314 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 UMPSP11172 480 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 IFNGR1P15260 489 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 FOSL1P15407 271 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 FUT4P22083 530 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 GSK3BP49841 420 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 UGT2B15P54855 530 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 UBE2NP61088 152 aaKnown RBP12.88□□□□□ -0.35
USE1-202ENST00000445667 GNGT1P63211 74 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 HACD2Q6Y1H2 254 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 C20orf196Q8IYI0 205 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
USE1-202ENST00000445667 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 PFN4Q8NHR9 129 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 MAGEE2Q8TD90 523 aaPredicted RBP12.88□□□□□ -0.35
USE1-202ENST00000445667 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
USE1-202ENST00000445667 CMTM5Q96DZ9 223 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 SMR3AQ99954 134 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 DHRS9Q9BPW9 319 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 NSRP1Q9H0G5 558 aaKnown RBP12.88□□□□□ -0.35
USE1-202ENST00000445667 FKRPQ9H9S5 495 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 MOKQ9UQ07 419 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 ATP23Q9Y6H3 246 aa12.88□□□□□ -0.35
USE1-202ENST00000445667 IGHV1-18A0A0C4DH31 117 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 TRIM64A6NGJ6 449 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 ATP6V1G2-DDX39BF2Z307 99 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 BLOC1S5-TXNDC5H3BN57 136 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 H7C1Q1 480 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 RNF13O43567 381 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 NDUFS7O75251 213 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 MT-ND1P03886 318 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 HIST1H2ABP04908 130 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 ASAH2BP0C7U1 165 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 YAP1P46937 504 aaKnown RBP12.87□□□□□ -0.35
USE1-202ENST00000445667 FABP6P51161 128 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 SH3BGRP55822 239 aaPredicted RBP12.87□□□□□ -0.35
USE1-202ENST00000445667 BIDP55957 195 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 PSME3P61289 254 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 ZP4Q12836 540 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 SLC35D2Q76EJ3 337 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 SLC46A3Q7Z3Q1 461 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 DTX2Q86UW9 622 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 OR6N1Q8NGY5 312 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 TMEM239Q8WW34 195 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 LZICQ8WZA0 190 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 TRMT61AQ96FX7 289 aaKnown RBP12.87□□□□□ -0.35
USE1-202ENST00000445667 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 LRR1Q96L50 414 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
USE1-202ENST00000445667 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
USE1-202ENST00000445667 ALG2Q9H553 416 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 C20orf141Q9NUB4 165 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 ZNF229Q9UJW7 825 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
USE1-202ENST00000445667 ARPC4-TTLL3A0A0A6YYG9 625 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 ZNF503-AS2A6NEH8 195 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 ZNF99A8MXY4 864 aaPredicted RBP12.86□□□□□ -0.35
USE1-202ENST00000445667 J3KTA2 159 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 ZNF682O95780 498 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 INHBBP09529 407 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 NCK1P16333 377 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 FUT1P19526 365 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 TTKP33981 857 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
USE1-202ENST00000445667 MELKQ14680 651 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms