RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TAS2R5Q9NYW4 299 aa12.48□□□□□ -0.41
SSBP3-208ENST00000444533 B3GAT1Q9P2W7 334 aa12.48□□□□□ -0.41
SSBP3-208ENST00000444533 PRSS50Q9UI38 385 aa12.48□□□□□ -0.41
SSBP3-208ENST00000444533 CACNA1CQ13936 2221 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 SH3D21A4FU49 640 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 UNC119BA6NIH7 251 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 C19orf84I3L1E1 186 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 CLOCKO15516 846 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 FKBP6O75344 327 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 ENTPD5O75356 428 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 DEAF1O75398 565 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-208ENST00000444533 IFNGR1P15260 489 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 MAKP20794 623 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 AQP2P41181 271 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 SELENOPP49908 381 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 ERFP50548 548 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 HMGA2P52926 109 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 IQCCQ4KMZ1 466 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 SFRP5Q5T4F7 317 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 BHLHA15Q7RTS1 189 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-208ENST00000444533 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.47□□□□□ -0.41
SSBP3-208ENST00000444533 GABRG1Q8N1C3 465 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 ZIC4Q8N9L1 334 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 FAM222BQ8WU58 562 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 ZNF566Q969W8 418 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 MUCL1Q96DR8 90 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 DACH2Q96NX9 599 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 ZNF556Q9HAH1 456 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 KCNN3Q9UGI6 736 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 HIF3AQ9Y2N7 669 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 AP4S1Q9Y587 144 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 LYVE1Q9Y5Y7 322 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 U3KQV3 271 aa12.47□□□□□ -0.41
SSBP3-208ENST00000444533 TRAV27A0A087WT01 109 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 SLC35F4A4IF30 521 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-208ENST00000444533 NDUFB2O95178 105 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 HPRP00739 348 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 IGHG1P01857 330 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 F13BP05160 661 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 MPGP29372 298 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 OMPP47874 163 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 CSNK1A1P48729 337 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 SH3BGRP55822 239 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-208ENST00000444533 BIDP55957 195 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 CLRN1P58418 232 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 CTXN1P60606 82 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 LAPTM4AQ15012 233 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 SEC23BQ15437 767 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 ZSCAN26Q16670 478 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 MICAQ29983 383 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 CARD17Q5XLA6 110 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 FAM205BPQ63HN1 556 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 OR13C2Q8NGS9 318 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 OR6X1Q8NH79 312 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 SLC25A44Q96H78 314 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-208ENST00000444533 LRR1Q96L50 414 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 OR2M2Q96R28 347 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 BDH2Q9BUT1 245 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 POLDIP3Q9BY77 421 aaKnown RBP12.46□□□□□ -0.41
SSBP3-208ENST00000444533 ACTR6Q9GZN1 396 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 SLC7A10Q9NS82 523 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 MED29Q9NX70 200 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 GRHPRQ9UBQ7 328 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 DNAJB9Q9UBS3 223 aa12.46□□□□□ -0.41
SSBP3-208ENST00000444533 BAHCC1Q9P281 2608 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 ICE1Q9Y2F5 2266 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 SPTAN1Q13813 2472 aaKnown RBP12.45□□□□□ -0.42
SSBP3-208ENST00000444533 A6NIZ1 184 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 XKRYO14609 159 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 LYZL6O75951 148 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 EPXP11678 715 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 HLA-DOBP13765 273 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 IGFBP2P18065 325 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 GSTM3P21266 225 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 FPR3P25089 353 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 FASP25445 335 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 COL8A1P27658 744 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 RAP1BP61224 184 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 RPS4XP62701 263 aaKnown RBP12.45□□□□□ -0.42
SSBP3-208ENST00000444533 RAP1AP62834 184 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-208ENST00000444533 CAMK2DQ13557 499 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 STK11Q15831 433 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 RPL13AP3Q6NVV1 102 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 ZFP1Q6P2D0 407 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
SSBP3-208ENST00000444533 MEX3DQ86XN8 651 aaKnown RBP12.45□□□□□ -0.42
SSBP3-208ENST00000444533 PAPD5Q8NDF8 572 aaKnown RBP12.45□□□□□ -0.42
SSBP3-208ENST00000444533 OR52L1Q8NGH7 329 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 FANK1Q8TC84 345 aa12.45□□□□□ -0.42
SSBP3-208ENST00000444533 FNDC8Q8TC99 324 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms