RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SEMG1P04279 462 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 SAGP10523 405 aaPredicted RBP15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 HOXC12P31275 282 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 FOXG1P55316 489 aaPredicted RBP15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 SMIM11AP58511 58 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 LGALS3BPQ08380 585 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 DGCR6Q14129 220 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 PPA1Q15181 289 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 FGD3Q5JSP0 725 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 LCN8Q6JVE9 175 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 HMBOX1Q6NT76 420 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 MBOAT2Q6ZWT7 520 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 SLC35D2Q76EJ3 337 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 CDC20BQ86Y33 519 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 C1orf162Q8NEQ5 155 aaPredicted RBP15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 LIPHQ8WWY8 451 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 POP5Q969H6 163 aaKnown RBP15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 ASB9Q96DX5 294 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 TXNDC15Q96J42 360 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 CLPTM1LQ96KA5 538 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 LRGUKQ96M69 825 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 BTBD10Q9BSF8 475 aa15.36■□□□□ 0.05
SMARCAL1-209ENST00000444508 SPG11Q96JI7 2443 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 A0A087WUU8 490 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 A0A1W2PRG6 482 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 SLC35F4A4IF30 521 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 IFNGR1P15260 489 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 CDH2P19022 906 aaPredicted RBP15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 FUT4P22083 530 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 NR1H2P55055 460 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 BIDP55957 195 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 PRKCDQ05655 676 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 RPL18Q07020 188 aaKnown RBP15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 GABRA6Q16445 453 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 CARD17Q5XLA6 110 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 TMEM123Q8N131 208 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 C17orf78Q8N4C9 275 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 SLC7A13Q8TCU3 470 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 ADAD1Q96M93 576 aaKnown RBP15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 MUS81Q96NY9 551 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 ZNF347Q96SE7 839 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 SEPHS2Q99611 448 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 EMC6Q9BV81 110 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 TRIM15Q9C019 465 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 IL1RAPQ9NPH3 570 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 B3GAT2Q9NPZ5 323 aa15.35■□□□□ 0.05
SMARCAL1-209ENST00000444508 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 EFCAB9A8MZ26 197 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 M0R3G1 203 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 SIAH2O43255 324 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 KLF4O43474 513 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 AQP2P41181 271 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 SH3BGRP55822 239 aaPredicted RBP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 LSM11P83369 360 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 MS4A2Q01362 244 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 SPIBQ01892 262 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 ROR2Q01974 943 aaKnown RBP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 BNIP1Q12981 228 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 PODNL1Q6PEZ8 512 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 TBPL2Q6SJ96 375 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 KLHL24Q6TFL4 600 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 NHLRC1Q6VVB1 395 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 ZDHHC21Q8IVQ6 265 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 C20orf196Q8IYI0 205 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 OR6N1Q8NGY5 312 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 OR52N5Q8NH56 324 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 OR52J3Q8NH60 311 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 SLC7A6OSQ96CW6 309 aaPredicted RBP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 PLPPR2Q96GM1 343 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 LRR1Q96L50 414 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 ESRP2Q9H6T0 727 aaKnown RBP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 KRCC1Q9NPI7 259 aaPredicted RBP15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 INIPQ9NRY2 104 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 EDARQ9UNE0 448 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 TMEM5Q9Y2B1 443 aa15.34■□□□□ 0.05
SMARCAL1-209ENST00000444508 PDZD2O15018 2839 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 MCIDASD6RGH6 385 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 RPL36A-HNRNPH2H7BZ11 118 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 DNAJC8O75937 253 aaPredicted RBP15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 ATP5HO75947 161 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 GADD45GO95257 159 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 BCL10O95999 233 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 F13BP05160 661 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 MAKP20794 623 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 SLC9A3P48764 834 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 RASSF2P50749 326 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 TRAP1Q12931 704 aaKnown RBP15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 CAMK2DQ13557 499 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 ANKDD1AQ495B1 522 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 IQCCQ4KMZ1 466 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 LINGO2Q7L985 606 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 HDDC2Q7Z4H3 204 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 OAFQ86UD1 273 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 CDH24Q86UP0 819 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 OR6X1Q8NH79 312 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 MOSPD2Q8NHP6 518 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 DHRS1Q96LJ7 313 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 CRLF2Q9HC73 371 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 GPR35Q9HC97 309 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 SLC17A5Q9NRA2 495 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms