RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 FAM212BQ9NTI7 297 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 SPG21Q9NZD8 308 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 STEAP1Q9UHE8 339 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 SCN7AQ01118 1682 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 A0A0U1RQF3 1178 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PPP1R3DO95685 299 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CD3DP04234 171 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 IL13RA1P78552 427 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PRRT3Q5FWE3 981 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF529Q6P280 563 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 HIST2H3AQ71DI3 136 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CCDC116Q8IYX3 515 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 B4GALT6Q9UBX8 382 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ADAM29Q9UKF5 820 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 DBX1A6NMT0 343 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 MBP02144 154 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CHATP28329 748 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 TAS2R31P59538 309 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 DHRS2Q13268 280 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 Q6ZVL8 140 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 LMNTD1Q8N9Z9 388 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 EIF5A2Q9GZV4 153 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 SLCO5A1Q9H2Y9 848 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 OR2S2Q9NQN1 319 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 A0A087X0M5 115 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 A0A1B0GX30 115 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 FAM171A2A8MVW0 826 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 UMAD1C9J7I0 102 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PCDH8O95206 1070 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 IGFALSP35858 605 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 TRA2BP62995 288 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 PLA2G7Q13093 441 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF345Q14585 488 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 TMEM151BQ8IW70 566 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CDS1Q92903 461 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PRO1933Q9H354 126 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF443Q9Y2A4 671 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 CSAG2Q9Y5P2 127 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 NDUFS4O43181 175 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 STC2O76061 302 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CD79AP11912 226 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 P2RY4P51582 365 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZG16BQ96DA0 208 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 NAA11Q9BSU3 229 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF426Q9BUY5 554 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ALX4Q9H161 411 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 METTL8Q9H825 291 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 LUZP4Q9P127 313 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PUS1Q9Y606 427 aaKnown RBP eCLIP4.62□□□□□ -1.67
HERC1-201ENST00000443617 KPTNQ9Y664 436 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 SPTBN2O15020 2390 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 MEX3AA1L020 520 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF44P15621 663 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 RAB4AP20338 218 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 NT5EP21589 574 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 NKX6-1P78426 367 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 VRK2Q86Y07 508 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF417Q8TAU3 575 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CPNE4Q96A23 557 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 PEX11GQ96HA9 241 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 MYADMQ96S97 322 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 UTP23Q9BRU9 249 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 OR52D1Q9H346 318 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 TEX13DA0A0J9YY54 714 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 MUC1P15941 1255 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 DVL1P1P54792 670 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 PCBP4P57723 403 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 EFNB1P98172 346 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 OR1Q1Q15612 314 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 MRM1Q6IN84 353 aaKnown RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 REC114Q7Z4M0 266 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 SYS1Q8N2H4 156 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 GPR148Q8TDV2 347 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 TMEM255BQ8WV15 326 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 AUTS2Q8WXX7 1259 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 IL17FQ96PD4 163 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 SARGQ9BW04 601 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 TAC3Q9UHF0 121 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PCYT1BQ9Y5K3 369 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 TP53BP1Q12888 1972 aaPredicted RBP4.62□□□□□ -1.67
HERC1-201ENST00000443617 MAN2B1O00754 1011 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 OGG1O15527 345 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 C8orf89P0DMQ9 161 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ATP1B3P54709 279 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ODF4Q2M2E3 257 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 COMTD1Q86VU5 262 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF280BQ86YH2 543 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 NKAIN4Q8IVV8 208 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 COMMD1Q8N668 190 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 RASGEF1AQ8N9B8 481 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ZNF480Q8WV37 535 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 PPP1R1CQ8WVI7 109 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 CHRDQ9H2X0 955 aa4.62□□□□□ -1.67
HERC1-201ENST00000443617 ANKRD20A5PA0PJZ0 165 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CD81P60033 236 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 HTRA3P83110 453 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ALG11Q2TAA5 492 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 AMZ1Q400G9 498 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 RALGAPA1Q6GYQ0 2036 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SLC35F3Q8IY50 421 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms