RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 IST1P53990 364 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 FXYD6P3P58550 94 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 GABPB1Q06547 395 aaPredicted RBP14.14□□□□□ -0.15
USP39-205ENST00000442708 PHYHD1Q5SRE7 291 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 ANKRD34AQ69YU3 496 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 RRM2BQ7LG56 351 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 YTHDF3Q7Z739 585 aaKnown RBP14.14□□□□□ -0.15
USP39-205ENST00000442708 TMEM179BQ7Z7N9 219 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 OAFQ86UD1 273 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 TMEM123Q8N131 208 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 UBE2J2Q8N2K1 259 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 LRRC75AQ8NAA5 344 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 SPOCK3Q9BQ16 436 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 SLCO5A1Q9H2Y9 848 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 MCCC2Q9HCC0 563 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 MALT1Q9UDY8 824 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 RCE1Q9Y256 329 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 TMEM5Q9Y2B1 443 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 U3KQV3 271 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 PRR14LQ5THK1 2151 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 SLC35F4A4IF30 521 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 C16orf97H3BN30 126 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 PDLIM1O00151 329 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 PTP4A3O75365 173 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 LYZL6O75951 148 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 CST1P01037 141 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 ITGA5P08648 1049 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 PCYT1AP49585 367 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 BIDP55957 195 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 SORDQ00796 357 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 FAPQ12884 760 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 MELKQ14680 651 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 SFRP5Q5T4F7 317 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 CARD17Q5XLA6 110 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 ZNF770Q6IQ21 691 aaPredicted RBP14.13□□□□□ -0.15
USP39-205ENST00000442708 PGBD2Q6P3X8 592 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 SLC35D2Q76EJ3 337 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 IGFN1Q86VF2 1251 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 KIF18BQ86Y91 864 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 CDK20Q8IZL9 346 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 OR9Q2Q8NGE9 314 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 LRRC46Q96FV0 321 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 RSRC1Q96IZ7 334 aaKnown RBP14.13□□□□□ -0.15
USP39-205ENST00000442708 CRIM1Q9NZV1 1036 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 SIGLEC7Q9Y286 467 aa14.13□□□□□ -0.15
USP39-205ENST00000442708 HRNRQ86YZ3 2850 aaPredicted RBP14.13□□□□□ -0.15
USP39-205ENST00000442708 ANKHD1Q8IWZ3 2542 aaKnown RBP14.13□□□□□ -0.15
USP39-205ENST00000442708 FBN2P35556 2912 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 CLOCKO15516 846 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 TIPRLO75663 272 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 CIB2O75838 187 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 CNOT4O95628 575 aaKnown RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 COX6B1P14854 86 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 PSMB1P20618 241 aaKnown RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 COX5AP20674 150 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 GSSP48637 474 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 RUNX1T1Q06455 604 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 CAMK2DQ13557 499 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 KPNB1Q14974 876 aaKnown RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 ZBED5Q49AG3 693 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 C9orf135Q5VTT2 229 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 ZNF295-AS1Q8N0V1 137 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 ZNF433Q8N7K0 673 aaPredicted RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 ZNF837Q96EG3 531 aaPredicted RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 DUS3LQ96G46 650 aaKnown RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 WFIKKN1Q96NZ8 548 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 INIPQ9NRY2 104 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 TMCC3Q9ULS5 477 aa14.12□□□□□ -0.15
USP39-205ENST00000442708 SAMHD1Q9Y3Z3 626 aaKnown RBP14.12□□□□□ -0.15
USP39-205ENST00000442708 UNC79Q9P2D8 2635 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 UNC119BA6NIH7 251 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 MCIDASD6RGH6 385 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 OR10H3O60404 316 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 CCNB2O95067 398 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 KIR2DL3P43628 341 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 SLC9A3P48764 834 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 ITGADQ13349 1161 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 P2RY6Q15077 328 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 ACKR1Q16570 336 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 ALG10Q5BKT4 473 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 C1orf94Q6P1W5 598 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 THSD4Q6ZMP0 1018 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 C20orf196Q8IYI0 205 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 ALKBH3Q96Q83 286 aaPredicted RBP14.11□□□□□ -0.15
USP39-205ENST00000442708 LINC00470Q9BZP3 86 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 REEP1Q9H902 201 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 NTN4Q9HB63 628 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 ASB6Q9NWX5 421 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 UPB1Q9UBR1 384 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 IL20RAQ9UHF4 553 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 GPR52Q9Y2T5 361 aa14.11□□□□□ -0.15
USP39-205ENST00000442708 SH3D21A4FU49 640 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 TUBAL3A6NHL2 446 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 SLC43A1O75387 559 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 GASTP01350 101 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 THBDP07204 575 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 FPR3P25089 353 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 DNAJA1P31689 397 aaKnown RBP14.1□□□□□ -0.15
USP39-205ENST00000442708 CTXN1P60606 82 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms