RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RANBP3LQ86VV4 465 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC26A11Q86WA9 606 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TMEM156Q8N614 296 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GVQW1Q8N7I0 195 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR4F17Q8NGA8 305 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR10G8Q8NGN5 311 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR4F5Q8NH21 305 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2V1Q8NHB1 315 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SMAP2Q8WU79 429 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 FAM172AQ8WUF8 416 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NUDCD2Q8WVJ2 157 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNRF4Q8WWF5 429 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 DNAJB3Q8WWF6 145 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 MAFIPQ8WZ33 124 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 HGDQ93099 445 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 CCDC124Q96CT7 223 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 C12orf42Q96LP6 360 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR4F4Q96R69 305 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OVOL2Q9BRP0 275 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 RPP25Q9BUL9 199 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SRRQ9GZT4 340 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PIGUQ9H490 435 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 WDR54Q9H977 334 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GPN2Q9H9Y4 310 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 CD209Q9NNX6 404 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 MYOZ1Q9NP98 299 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 MYOZ2Q9NPC6 264 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PHF11Q9UIL8 331 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ABCG2Q9UNQ0 655 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TSSC4Q9Y5U2 329 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 STRCP1A6NGW2 1772 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 COL3A1P02461 1466 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NEO1Q92859 1461 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZFYVE16Q7Z3T8 1539 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 EIF3AQ14152 1382 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 TNRQ92752 1358 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 A0A1B0GV90 55 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ARHGEF33A8MVX0 844 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 M0QXV9 152 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF195O14628 629 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SURF4O15260 269 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 TOXO94900 526 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 CST4P01036 141 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 GAPDHP04406 335 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SERPINA5P05154 406 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SERPINE2P07093 398 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ME2P23368 584 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 WARSP23381 471 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 LAP3P28838 519 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 AQP2P41181 271 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 MAGEA5P43359 124 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ART1P52961 327 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 AP1S1P61966 158 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 CHRNB3Q05901 458 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 RBBP4Q09028 425 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 GPNMBQ14956 572 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 TAB1Q15750 504 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SYPL1Q16563 259 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 HAGHQ16775 308 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 IMPG1Q17R60 797 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 NDUFAF6Q330K2 333 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 LGSNQ5TDP6 509 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 REEP3Q6NUK4 255 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ARMCX5Q6P1M9 558 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 PNCKQ6P2M8 343 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF790Q6PG37 636 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SYCE2Q6PIF2 218 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 C3P1Q6ZMU1 363 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 C9orf47Q6ZRZ4 202 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SERPINA9Q86WD7 417 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF100Q8IYN0 542 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 HS3ST5Q8IZT8 346 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 STPG4Q8N801 248 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ATP6V0D2Q8N8Y2 350 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 C12orf29Q8N999 325 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2L5Q8NG80 312 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2L8Q8NGY9 312 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ACOT11Q8WXI4 607 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 FAM3CQ92520 227 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 TM9SF4Q92544 642 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 UPRTQ96BW1 309 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF486Q96H40 463 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF778Q96MU6 729 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 C12orf57Q99622 126 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 CENPKQ9BS16 269 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 C20orf24Q9BUV8 137 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 C11orf49Q9H6J7 331 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 IL1RL2Q9HB29 575 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 NMUR1Q9HB89 426 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 SMOXQ9NWM0 555 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 STMN3Q9NZ72 180 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 GHRLQ9UBU3 117 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 CA5BQ9Y2D0 317 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 BCL9LQ86UU0 1499 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 MYH15Q9Y2K3 1946 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 ESYT2A0FGR8 921 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 H3BN98 237 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 hCG_2039718K7EN88 272 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 TCAPO15273 167 aa3.48□□□□□ -1.85
CDC42BPA-207ENST00000441725 RS1O15537 224 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms