RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 LINC00587B1AMM8 73 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 H0Y8X5 98 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 MAGEB4O15481 346 aaPredicted RBP10.88□□□□□ -0.67
LTBR-203ENST00000441074 CTNSO60931 367 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 RBBP9O75884 186 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 GLSO94925 669 aaPredicted RBP10.88□□□□□ -0.67
LTBR-203ENST00000441074 SLC35G4P0C7Q5 338 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 OR2T7P0C7T2 308 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 PSMB5P28074 263 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 ZNF136P52737 540 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 PDX1P52945 283 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 HCCSP53701 268 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 CLDN12P56749 244 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 UBE2IP63279 158 aaKnown RBP10.88□□□□□ -0.67
LTBR-203ENST00000441074 TNFRSF17Q02223 184 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 DUSP2Q05923 314 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 ENPP2Q13822 863 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 GAS6Q14393 721 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 FAM209BQ5JX69 171 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 MANEAQ5SRI9 462 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 METRNLQ641Q3 311 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 FCRLBQ6BAA4 426 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 OR2W3Q7Z3T1 314 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 SPAG16Q8N0X2 631 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 CYB561A3Q8NBI2 242 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 OR4C16Q8NGL9 310 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 OR2T27Q8NH04 317 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 TMEM239Q8WW34 195 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 SLC25A28Q96A46 364 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 PDCD1LG2Q9BQ51 273 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 TTTY10Q9BZA0 68 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 FAM117AQ9C073 453 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 SLC25A18Q9H1K4 315 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 MTHFD2LQ9H903 347 aaPredicted RBP10.88□□□□□ -0.67
LTBR-203ENST00000441074 C2orf42Q9NWW7 574 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 SIGLEC7Q9Y286 467 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 ETV7Q9Y603 341 aa10.88□□□□□ -0.67
LTBR-203ENST00000441074 MUC22E2RYF6 1773 aaPredicted RBP10.88□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3DA0A087WVF3 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3IA0A087WXS9 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3EA0A087X179 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3KA0A087X1G2 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 KANTRA0A1W2PQU2 76 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3FA6NER0 549 aaPredicted RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3LB9A6J9 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 H7C417 338 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 PPM1DO15297 605 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3HP0C7X1 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 HOXB2P14652 356 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 CSNK2A2P19784 350 aaPredicted RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 NTSR1P30989 418 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 RPS15P62841 145 aaKnown RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 PPIAP62937 165 aaKnown RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 ZP2Q05996 745 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 RPE65Q16518 533 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3GQ6DHY5 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3CQ6IPX1 549 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 JMJD6Q6NYC1 403 aaPredicted RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 TMEM92Q6UXU6 159 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ZNF793Q6ZN11 406 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ZNF836Q6ZNA1 936 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 FRRS1Q6ZNA5 592 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TMPRSS11FQ6ZWK6 438 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 RANBP3LQ86VV4 465 aaPredicted RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 CDK20Q8IZL9 346 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TBC1D3Q8IZP1 549 aaPredicted RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 STK35Q8TDR2 534 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 RAB11FIP5Q9BXF6 653 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ACTRT3Q9BYD9 372 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ALX4Q9H161 411 aaPredicted RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 TAS2R8Q9NYW2 309 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 MTFP1Q9UDX5 166 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 MOKQ9UQ07 419 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 NCOR1O75376 2440 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 A0A1W2PQU0 124 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 OR2F2O95006 317 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 SNAPINO95295 136 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 GYPBP06028 91 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 GLAP06280 429 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 CSF1P09603 554 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 NDUFS1P28331 727 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ADH7P40394 386 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 NR0B1P51843 470 aaKnown RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 CLDN2P57739 230 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 CDK3Q00526 305 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 PRDX1Q06830 199 aaKnown RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 OR2F1Q13607 317 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ZNF345Q14585 488 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 IRF4Q15306 451 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ZIC1Q15915 447 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 GUCA2BQ16661 112 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 PCGF3Q3KNV8 242 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 PAN3Q58A45 887 aaKnown RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 C10orf91Q5T1B1 145 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 MRM1Q6IN84 353 aaKnown RBP10.87□□□□□ -0.67
LTBR-203ENST00000441074 MTSS1LQ765P7 747 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 CBLN2Q8IUK8 224 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms