RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 KRT33BQ14525 404 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 DCST2Q5T1A1 773 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 TMEM184AQ6ZMB5 413 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 TMEM185AQ8NFB2 350 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 MBNL1Q9NR56 388 aaKnown RBP12.38□□□□□ -0.43
PCNX3-202ENST00000439247 HAO2Q9NYQ3 351 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 MTCH2Q9Y6C9 303 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 CXorf51AA0A1B0GTR3 108 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 OR6C68A6NDL8 312 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 DUXAA6NLW8 204 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 CCSO14618 274 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 PRAMEF2O60811 474 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 OR2T7P0C7T2 308 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 ST8SIA6P61647 398 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 GUCA2BQ16661 112 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 NDUFAF6Q330K2 333 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 FNDC3BQ53EP0 1204 aaKnown RBP12.38□□□□□ -0.43
PCNX3-202ENST00000439247 PABPC1L2AQ5JQF8 200 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 TMED4Q7Z7H5 227 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 NRROSQ86YC3 692 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 LRRC25Q8N386 305 aaPredicted RBP12.38□□□□□ -0.43
PCNX3-202ENST00000439247 OR51A4Q8NGJ6 313 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 S1PR5Q9H228 398 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 BARX1Q9HBU1 254 aaPredicted RBP12.38□□□□□ -0.43
PCNX3-202ENST00000439247 DZANK1Q9NVP4 752 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 SLC6A5Q9Y345 797 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF337Q9Y3M9 751 aa12.38□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF254O75437 659 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 CD3DP04234 171 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 NID1P14543 1247 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 CBX5P45973 191 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ARFIP1P53367 373 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 DHCR24Q15392 516 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 DEFB134Q4QY38 66 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 MCATQ8IVS2 390 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 DND1Q8IYX4 353 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RNF113BQ8IZP6 322 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 OR52E1Q8NGJ3 308 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ICAM5Q9UMF0 924 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 A0A1B0GWA3 101 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RNGTTO60942 597 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RBBP9O75884 186 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 GTF2F2P13984 249 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 EMDP50402 254 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RAB28P51157 221 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ACTA2P62736 377 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ACTG2P63267 376 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 FLI1Q01543 452 aaPredicted RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 LTBQ06643 244 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 DPTQ07507 201 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 MTSS1LQ765P7 747 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF619Q8N2I2 560 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 C2CD4CQ8TF44 421 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 MIB2Q96AX9 1013 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 COX14Q96I36 57 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 SEC22AQ96IW7 307 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 KXD1Q9BQD3 176 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 UTP23Q9BRU9 249 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 PTDSS2Q9BVG9 487 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ATPIF1Q9UII2 106 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF281Q9Y2X9 895 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ATG2BQ96BY7 2078 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 LRRC72A6NJI9 287 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RAD1O60671 282 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 GLSO94925 669 aaPredicted RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RASGRP1O95267 797 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 RPL4P36578 427 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 VITQ6UXI7 678 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 OR51D1Q8NGF3 324 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 FGF14Q92915 247 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 ZNF350Q9GZX5 532 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 EXO5Q9H790 373 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 SCPEP1Q9HB40 452 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 TCF7L1Q9HCS4 588 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 CHRNA9Q9UGM1 479 aa12.37□□□□□ -0.43
PCNX3-202ENST00000439247 PURGQ9UJV8 347 aaKnown RBP12.37□□□□□ -0.43
PCNX3-202ENST00000439247 CACNA1IQ9P0X4 2223 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 TBC1D3KA0A087X1G2 549 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 TBC1D3BA6NDS4 549 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 TBC1D3FA6NER0 549 aaPredicted RBP12.36□□□□□ -0.43
PCNX3-202ENST00000439247 ATG12O94817 140 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 PRNPP04156 253 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 STARP49675 285 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 UBE2IP63279 158 aaKnown RBP12.36□□□□□ -0.43
PCNX3-202ENST00000439247 PON3Q15166 354 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 EIPR1Q53HC9 387 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 LY6G6FQ5SQ64 297 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 TBC1D3GQ6DHY5 549 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 PARM1Q6UWI2 310 aa12.36□□□□□ -0.43
PCNX3-202ENST00000439247 PUSL1Q8N0Z8 303 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms