RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGKV3-15P01624 115 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 BGLAPP02818 100 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 ERCC1P07992 297 aaPredicted RBP16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 AHCYP23526 432 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 CALCRP30988 508 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 MTPNP58546 118 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 PUDPQ08623 228 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 NFYCQ13952 458 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 ADIPOQQ15848 244 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 MS4A18Q3C1V0 323 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 CYB5R2Q6BCY4 276 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 ZNF613Q6PF04 617 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 SNX32Q86XE0 403 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 SLC30A8Q8IWU4 369 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 NUP37Q8NFH4 326 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 OR6N1Q8NGY5 312 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 CKAP2Q8WWK9 683 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 STON2Q8WXE9 905 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 NANOS1Q8WY41 292 aaKnown RBP16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 SLC41A3Q96GZ6 507 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 ANKRD27Q96NW4 1050 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 KCNK17Q96T54 332 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 CGREF1Q99674 301 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 TMEM43Q9BTV4 400 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 EMC6Q9BV81 110 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 SEC61A2Q9H9S3 476 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 NPHS2Q9NP85 383 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 MYOZ1Q9NP98 299 aaPredicted RBP16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 ARGLU1Q9NWB6 273 aaPredicted RBP16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 MRPL39Q9NYK5 338 aaKnown RBP16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 USP22Q9UPT9 525 aa16.03■□□□□ 0.16
AC004540.1-201ENST00000439120 M0R3H8 397 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 NDUFS8O00217 210 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 FMO6PO60774 539 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 OR6A2O95222 327 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 HPRP00739 348 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 OPN1SWP03999 348 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 VIMP08670 466 aaKnown RBP16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 CELA3BP08861 270 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 HLA-DOBP13765 273 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 LSM11P83369 360 aaKnown RBP eCLIP16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 GGTLC2Q14390 218 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 CXXC5Q7LFL8 322 aaKnown RBP16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 PTOV1Q86YD1 416 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 C20orf196Q8IYI0 205 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 DPP10Q8N608 796 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 ANKS4BQ8N8V4 417 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 IL17RDQ8NFM7 739 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 SLC26A7Q8TE54 656 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 ZNF837Q96EG3 531 aaPredicted RBP16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 MOGAT1Q96PD6 335 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 ULBP2Q9BZM5 246 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 RAB1BQ9H0U4 201 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 MED29Q9NX70 200 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 CDC42EP3Q9UKI2 254 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 POFUT2Q9Y2G5 429 aa16.02■□□□□ 0.16
AC004540.1-201ENST00000439120 SONP18583 2426 aaKnown RBP16.02■□□□□ 0.15
AC004540.1-201ENST00000439120 A0A0G2JND7 137 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 SLC35F4A4IF30 521 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 M0QX08 132 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 TPST2O60704 377 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 MT-ATP6P00846 226 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 C8BP07358 591 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 ADORA3P0DMS8 318 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 CD79AP11912 226 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 NPR2P20594 1047 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 PPOXP50336 477 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 PCBP3P57721 371 aaKnown RBP16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 CAMK2DQ13557 499 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 EFNB3Q15768 340 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 PATL1Q86TB9 770 aaKnown RBP16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 MDP1Q86V88 176 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 VANGL1Q8TAA9 524 aaPredicted RBP16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 LRR1Q96L50 414 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 ARHGDIGQ99819 225 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 WFDC6Q9BQY6 131 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 SIKE1Q9BRV8 207 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF442Q9H7R0 627 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 ARFGEF3Q5TH69 2177 aa16.01■□□□□ 0.15
AC004540.1-201ENST00000439120 IGHV2OR16-5A0A0B4J2B6 119 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 LOC390937A0A1W2PQ73 354 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 CPSF4LA6NMK7 179 aaKnown RBP16■□□□□ 0.15
AC004540.1-201ENST00000439120 LRRN3E7EW58 273 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 C11orf98E9PRG8 122 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 hCG_2039718K7EN88 272 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 CHP2O43745 196 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF16P17020 682 aaPredicted RBP16■□□□□ 0.15
AC004540.1-201ENST00000439120 THBS4P35443 961 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 GZMKP49863 264 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 DAG1Q14118 895 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 SELPLGQ14242 412 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 DUSP7Q16829 419 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 GSG1Q2KHT4 349 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 IQCCQ4KMZ1 466 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 ENTPD8Q5MY95 495 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 PHYHD1Q5SRE7 291 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 INTS11Q5TA45 600 aaKnown RBP16■□□□□ 0.15
AC004540.1-201ENST00000439120 TTC33Q6PID6 262 aaPredicted RBP16■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF813Q6ZN06 617 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms