RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 LYPD8Q6UX82 237 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 KCTD9Q7L273 389 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 KDM8Q8N371 416 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 PNLDC1Q8NA58 520 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 RBM24Q9BX46 236 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 LHX9Q9NQ69 397 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 FAM86C1Q9NVL1 165 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 MGAT4CQ9UBM8 478 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 EIF4E2O60573 245 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR8G3PP0DMU2 310 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 LIPCP11150 499 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 HOXC12P31275 282 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 RPS25P62851 125 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 Q5BKY6 102 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 FAM122AQ96E09 287 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 TEAD3Q99594 435 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARHGDIGQ99819 225 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 PLA2G12AQ9BZM1 189 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 TREM1Q9NP99 234 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR2S2Q9NQN1 319 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 A8MVM7 634 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 KDM4EB2RXH2 506 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ICAM2P13598 275 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 RFX2P48378 723 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 CTBP2P56545 445 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARFRP1Q13795 201 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 EIF2B1Q14232 305 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 FAM69AQ5T7M9 428 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 VASNQ6EMK4 673 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 LANCL3Q6ZV70 420 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 PEG10Q86TG7 708 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 MORN4Q8NDC4 146 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ACOT12Q8WYK0 555 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 NUDT9Q9BW91 350 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 VN1R1Q9GZP7 353 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 NXF2Q9GZY0 626 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 MBD2Q9UBB5 411 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 PLXNA4Q9HCM2 1894 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 METTL21EPA6NDL7 271 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM229AB2RXF0 380 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CBX7O95931 251 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 HRGP04196 525 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ITGA5P08648 1049 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR2T7P0C7T2 308 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 MAKP20794 623 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 RPS19P39019 145 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 MVDP53602 400 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 PLK5Q496M5 336 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 HES5Q5TA89 166 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 DPY19L4Q7Z388 723 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CCDC190Q86UF4 302 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 RPS19BP1Q86WX3 136 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR2T27Q8NH04 317 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 TRMT61AQ96FX7 289 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 BARHL1Q9BZE3 327 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ANKRD10Q9NXR5 420 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR2AT4A6NND4 320 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GABRPO00591 440 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CYR61O00622 381 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ARPC5O15511 151 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 DNAJB6O75190 326 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GCM2O75603 506 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 F10P00742 488 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GABRA5P31644 462 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ETV5P41161 510 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ETV1P50549 477 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SSR4P51571 173 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SSX1Q16384 188 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 COL28A1Q2UY09 1125 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC35D2Q76EJ3 337 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GRINAQ7Z429 371 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CPEB2Q7Z5Q1 589 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SPERTQ8NA61 448 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF471Q9BX82 626 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CDCA4Q9BXL8 241 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 C11orf54Q9H0W9 315 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SMOC1Q9H4F8 434 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 MCCC2Q9HCC0 563 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CMC2Q9NRP2 79 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 MAB21L2Q9Y586 359 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A1B0GV50 99 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 PRAMEF25A6NGN4 478 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 LRRTM2O43300 516 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ICMTO60725 284 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 IL1AP01583 271 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 P2RX1P51575 399 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 FXYD6P3P58550 94 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC26A5P58743 744 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 TEKQ02763 1124 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 PXDC1Q5TGL8 231 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 RAB11FIP2Q7L804 512 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 COMMD7Q86VX2 200 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CLEC1AQ8NC01 280 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM52Q8NDY8 209 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SYNPO2LQ9H987 977 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms