RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 SPATA24Q86W54 205 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 KRT73Q86Y46 540 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 PTOV1Q86YD1 416 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 C1orf162Q8NEQ5 155 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-201ENST00000437737 BHLHE22Q8NFJ8 381 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-201ENST00000437737 BBS10Q8TAM1 723 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 PIGXQ8TBF5 258 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 ZNF418Q8TF45 676 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-201ENST00000437737 RASSF5Q8WWW0 418 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 FAM162AQ96A26 154 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 DNAJA3Q96EY1 480 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 ZNF607Q96SK3 696 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 DENND2DQ9H6A0 471 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-201ENST00000437737 CACYBPQ9HB71 228 aaKnown RBP12.25□□□□□ -0.45
LINC01088-201ENST00000437737 POLE3Q9NRF9 147 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 DTNAQ9Y4J8 743 aa12.25□□□□□ -0.45
LINC01088-201ENST00000437737 FAM157AC9JC47 383 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 EIF4E2O60573 245 aaKnown RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 LILRA1O75019 489 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 SERPINB7O75635 380 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 GUSBP08236 651 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 DAOP14920 347 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 ETS2P15036 469 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 GIFP27352 417 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 KDELR2P33947 212 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 NTF4P34130 210 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 PPOXP50336 477 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 IDH3GP51553 393 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 RPS26P62854 115 aaKnown RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 MERTKQ12866 999 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 CCNIQ14094 377 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 ARHGAP11BQ3KRB8 267 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 GPAT3Q53EU6 434 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 PDLIM3Q53GG5 364 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 EXOSC6Q5RKV6 272 aaKnown RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 DCST2Q5T1A1 773 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 ZFP1Q6P2D0 407 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 SHQ1Q6PI26 577 aaKnown RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 VHLLQ6RSH7 139 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 LRRC74BQ6ZQY2 392 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 GLCCI1Q86VQ1 547 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 SLC26A7Q8TE54 656 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 SLC25A43Q8WUT9 341 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 SLC38A5Q8WUX1 472 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 WDR60Q8WVS4 1066 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 RAB8BQ92930 207 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 MTHFD2LQ9H903 347 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 BCL2L10Q9HD36 194 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 CA10Q9NS85 328 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 ADPRHL2Q9NX46 363 aa12.24□□□□□ -0.45
LINC01088-201ENST00000437737 SAMD4AQ9UPU9 718 aaKnown RBP12.24□□□□□ -0.45
LINC01088-201ENST00000437737 TRIM77I1YAP6 450 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 PDLIM1O00151 329 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 ETV2O00321 342 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-201ENST00000437737 BCHEP06276 602 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 GPIP06744 558 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 NUDT7P0C024 238 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 OR4A8P0C604 315 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 CDH2P19022 906 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-201ENST00000437737 RIPK1Q13546 671 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 TRIP10Q15642 601 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 AP1ARQ63HQ0 302 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 DEF8Q6ZN54 512 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 C10orf111Q8N326 155 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 OR5D16Q8NGK9 328 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 NFKBIDQ8NI38 313 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 FAM216AQ8WUB2 273 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 OIT3Q8WWZ8 545 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 TMEM234Q8WY98 164 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 MAL2Q969L2 176 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 RASSF4Q9H2L5 321 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 SERHL2Q9H4I8 314 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 YY1AP1Q9H869 796 aa12.23□□□□□ -0.45
LINC01088-201ENST00000437737 DCAF13Q9NV06 445 aaKnown RBP12.23□□□□□ -0.45
LINC01088-201ENST00000437737 SPIN1Q9Y657 262 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-201ENST00000437737 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 STX11O75558 287 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 CRYAAP02489 173 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 C1QCP02747 245 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 IFNGR1P15260 489 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 NCK1P16333 377 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 PGCP20142 388 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 SLC1A3P43003 542 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 SLC16A1P53985 500 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 SESN3P58005 492 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 FAM98BQ52LJ0 330 aaKnown RBP12.22□□□□□ -0.45
LINC01088-201ENST00000437737 C1QTNF12Q5T7M4 302 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 CYP2R1Q6VVX0 501 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 PEG10Q86TG7 708 aaKnown RBP12.22□□□□□ -0.45
LINC01088-201ENST00000437737 CCDC103Q8IW40 242 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
LINC01088-201ENST00000437737 DUS3LQ96G46 650 aaKnown RBP12.22□□□□□ -0.45
LINC01088-201ENST00000437737 TMEM19Q96HH6 336 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
LINC01088-201ENST00000437737 SAP130Q9H0E3 1048 aa12.22□□□□□ -0.45
LINC01088-201ENST00000437737 PLK3Q9H4B4 646 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms