RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 DOCK7Q96N67 2140 aa13.07□□□□□ -0.32
SKA2-202ENST00000437036 NPIPB13A6NJU9 1138 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 SAC3D1A6NKF1 404 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 NPIPB4C9JG80 1138 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 MSTNO14793 375 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 TRAF3IP2O43734 574 aaPredicted RBP13.06□□□□□ -0.32
SKA2-202ENST00000437036 SLC43A1O75387 559 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 HLA-DOBP13765 273 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 IFNGR1P15260 489 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 PRKACGP22612 351 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 SLC6A6P31641 620 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 OR3A2P47893 321 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 RCN1Q15293 331 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 NIPAL3Q6P499 406 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 ZNF620Q6ZNG0 422 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 LIX1LQ8IVB5 337 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 HS3ST5Q8IZT8 346 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 ZIC4Q8N9L1 334 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 OR52L1Q8NGH7 329 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
SKA2-202ENST00000437036 KCNJ16Q9NPI9 418 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 OAZ3Q9UMX2 235 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 CDH10Q9Y6N8 788 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 KIAA1549Q9HCM3 1950 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 MED12LQ86YW9 2145 aa13.06□□□□□ -0.32
SKA2-202ENST00000437036 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
SKA2-202ENST00000437036 FAM90A27PA6NNH2 459 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 KRT33AO76009 404 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 CLDN14O95500 239 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 CD14P08571 375 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 ASCL1P50553 236 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 BIDP55957 195 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 RFX4Q33E94 735 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 FAM205BPQ63HN1 556 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 TFAP2EQ6VUC0 442 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 DPY19L2P2Q6ZN68 376 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 BEND4Q6ZU67 534 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 LUZP2Q86TE4 346 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 UBE2J2Q8N2K1 259 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 CLDN22Q8N7P3 220 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 ZNF610Q8N9Z0 462 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 POMGNT2Q8NAT1 580 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 OR6X1Q8NH79 312 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 TXNDC15Q96J42 360 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 NIPSNAP1Q9BPW8 284 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 C9orf16Q9BUW7 83 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
SKA2-202ENST00000437036 GABARAPL1Q9H0R8 117 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 OPN3Q9H1Y3 402 aaPredicted RBP13.05□□□□□ -0.32
SKA2-202ENST00000437036 OR52D1Q9H346 318 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 TXNIPQ9H3M7 391 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 DCLRE1BQ9H816 532 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 MED29Q9NX70 200 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 GRHPRQ9UBQ7 328 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 ENOPH1Q9UHY7 261 aa13.05□□□□□ -0.32
SKA2-202ENST00000437036 MAGED1Q9Y5V3 778 aaPredicted RBP13.05□□□□□ -0.32
SKA2-202ENST00000437036 SLC35F4A4IF30 521 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 WIPF3A6NGB9 483 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 A6NIZ1 184 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 H3BN98 237 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 CNOT4O95628 575 aaKnown RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 CGAP01215 116 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 IGHMP01871 453 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 ANPEPP15144 967 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 SELENOPP49908 381 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 RAP1BP61224 184 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 RPL27P61353 136 aaKnown RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 RAP1AP62834 184 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 ERVK-25P63136 954 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 TOP3AQ13472 1001 aaPredicted RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 FHL1Q13642 323 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 ACKR1Q16570 336 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 GPR139Q6DWJ6 353 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 ABHD12BQ7Z5M8 362 aaPredicted RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 IGFN1Q86VF2 1251 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 GPR137CQ8N3F9 429 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 LRRC75AQ8NAA5 344 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 RELL2Q8NC24 303 aaPredicted RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 TEX47Q8TBZ9 253 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 SAMD8Q96LT4 415 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 RBM4BQ9BQ04 359 aaKnown RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 EMC6Q9BV81 110 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 KATNB1Q9BVA0 655 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 RBM4Q9BWF3 364 aaKnown RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 SLCO5A1Q9H2Y9 848 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 B3GAT2Q9NPZ5 323 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 PAPOLBQ9NRJ5 636 aaKnown RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 TBC1D23Q9NUY8 699 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 IL20Q9NYY1 176 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 FOXD3Q9UJU5 478 aaPredicted RBP13.04□□□□□ -0.32
SKA2-202ENST00000437036 POFUT2Q9Y2G5 429 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 PCNX1Q96RV3 2341 aa13.04□□□□□ -0.32
SKA2-202ENST00000437036 UBR5O95071 2799 aaPredicted RBP13.03□□□□□ -0.32
SKA2-202ENST00000437036 CLEC18AA5D8T8 446 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms