RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 SIT1Q9Y3P8 196 aa13.5□□□□□ -0.25
DDX56-205ENST00000433257 OR1A2Q9Y585 309 aa13.5□□□□□ -0.25
DDX56-205ENST00000433257 TICRRQ7Z2Z1 1910 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 NUMA1Q14980 2115 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 A0A0B4J203 849 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 CENPVL1A0A0U1RR11 272 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 TMEM212A6NML5 194 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 ANXA2P2A6NMY6 339 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 D6RAR5 112 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 PIN1P1O15428 100 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 ANXA2P07355 339 aaKnown RBP13.49□□□□□ -0.25
DDX56-205ENST00000433257 DRD1P21728 446 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 CDK2P24941 298 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 AK4P27144 223 aaPredicted RBP13.49□□□□□ -0.25
DDX56-205ENST00000433257 CAPZA1P52907 286 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 SIM1P81133 766 aaPredicted RBP13.49□□□□□ -0.25
DDX56-205ENST00000433257 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 FHL1Q13642 323 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 ALKBH1Q13686 389 aaKnown RBP13.49□□□□□ -0.25
DDX56-205ENST00000433257 ZNF273Q14593 569 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 GAB4Q2WGN9 574 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 CLVS2Q5SYC1 327 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 SLC36A1Q7Z2H8 476 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 NUP54Q7Z3B4 507 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 TMEM17Q86X19 198 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 IZUMO1Q8IYV9 350 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 NPEPL1Q8NDH3 523 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 OR2AK2Q8NG84 335 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 CTHRC1Q96CG8 243 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 LINC00052Q96N35 136 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 OR2A5Q96R48 311 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 TWSG1Q9GZX9 223 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 ARL6Q9H0F7 186 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 IL21RQ9HBE5 538 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 DNAJB12Q9NXW2 375 aaKnown RBP13.49□□□□□ -0.25
DDX56-205ENST00000433257 FLRT3Q9NZU0 649 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 USP36Q9P275 1121 aaKnown RBP13.49□□□□□ -0.25
DDX56-205ENST00000433257 KCNE5Q9UJ90 142 aa13.49□□□□□ -0.25
DDX56-205ENST00000433257 A0A1W2PPK0 400 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 LRRC72A6NJI9 287 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 ACOD1A6NK06 481 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 CDC40O60508 579 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDX56-205ENST00000433257 PMS2P2O95744 297 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 APODP05090 189 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 GYPBP06028 91 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 SLC35E2P0CK97 266 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
DDX56-205ENST00000433257 MGMTP16455 207 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 NAT1P18440 290 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 NAA10P41227 235 aaPredicted RBP13.48□□□□□ -0.25
DDX56-205ENST00000433257 ACAA2P42765 397 aaKnown RBP13.48□□□□□ -0.25
DDX56-205ENST00000433257 CENPAP49450 140 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 KIAA1024LP59773 190 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 EGR3Q06889 387 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 DEFB134Q4QY38 66 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 ZNF684Q5T5D7 378 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 FCRLBQ6BAA4 426 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 JAZF1Q86VZ6 243 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 GPR148Q8TDV2 347 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 LIPHQ8WWY8 451 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 PHYHIPLQ96FC7 376 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 PDCD1LG2Q9BQ51 273 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 SLC25A21Q9BQT8 299 aaPredicted RBP13.48□□□□□ -0.25
DDX56-205ENST00000433257 GINS4Q9BRT9 223 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 APOOQ9BUR5 198 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 POTEKPQ9BYX7 375 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 SEMA4CQ9C0C4 833 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 ACTR10Q9NZ32 417 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 PCOLCE2Q9UKZ9 415 aa13.48□□□□□ -0.25
DDX56-205ENST00000433257 A0A087WUJ7 227 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 FAM221BA6H8Z2 402 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 RFPL4AA6NLU0 287 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 OR52A4PA6NMU1 304 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 RFPL4AL1F8VTS6 287 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 PRAMEF2O60811 474 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 SDC3O75056 442 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 ZNF254O75437 659 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 PDGFBP01127 241 aaPredicted RBP13.47□□□□□ -0.25
DDX56-205ENST00000433257 RAB3AP20336 220 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 MAZP56270 477 aaKnown RBP13.47□□□□□ -0.25
DDX56-205ENST00000433257 LTBQ06643 244 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 CCINQ13939 588 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 ZNF776Q68DI1 518 aaPredicted RBP13.47□□□□□ -0.25
DDX56-205ENST00000433257 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 OR5M10Q6IEU7 315 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 TSSK4Q6SA08 328 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 OR4E2Q8NGC2 313 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 TOE1Q96GM8 510 aaKnown RBP13.47□□□□□ -0.25
DDX56-205ENST00000433257 GFI1Q99684 422 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 FOXQ1Q9C009 403 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 FBRSQ9HAH7 460 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 LMAN1LQ9HAT1 526 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 CA10Q9NS85 328 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 POT1Q9NUX5 634 aa13.47□□□□□ -0.25
DDX56-205ENST00000433257 MRPL15Q9P015 296 aaKnown RBP13.47□□□□□ -0.25
DDX56-205ENST00000433257 KLK11Q9UBX7 282 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms