RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 CLDN17P56750 224 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 RBBP4Q09028 425 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 NFYCQ13952 458 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 MAPRE2Q15555 327 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 MMEL1Q495T6 779 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 FBLN7Q53RD9 439 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
HOXD3-203ENST00000432796 CCDC36Q8IYA8 594 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 LINC01356Q8N9X3 169 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 ZNF540Q8NDQ6 660 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 MAGEB18Q96M61 343 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 OXGR1Q96P68 337 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 SH3GL1Q99961 368 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 C1QTNF6Q9BXI9 259 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 BPESC1Q9GZL8 116 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 TMEM38AQ9H6F2 299 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 VIPAS39Q9H9C1 493 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 SLCO1B3Q9NPD5 702 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 SLC6A13Q9NSD5 602 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 NPAP1Q9NZP6 1156 aa8.94□□□□□ -0.98
HOXD3-203ENST00000432796 CADP27708 2225 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 A0A0G2JND7 137 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 LOC390937A0A1W2PQ73 354 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 ZNF726A6NNF4 738 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 NUDT7P0C024 238 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 AQP1P29972 269 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 APOBEC3AP31941 199 aaPredicted RBP8.93□□□□□ -0.98
HOXD3-203ENST00000432796 IFNA8P32881 189 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 FOXL1Q12952 345 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 TBRG1Q3YBR2 411 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 ANKRD16Q6P6B7 361 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 C6orf89Q6UWU4 347 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 CREB3L2Q70SY1 520 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 H1FNTQ75WM6 255 aaPredicted RBP8.93□□□□□ -0.98
HOXD3-203ENST00000432796 LSMEM1Q8N8F7 131 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 OR1K1Q8NGR3 316 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 STON2Q8WXE9 905 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 FOXN4Q96NZ1 517 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 ZNF385AQ96PM9 386 aaKnown RBP8.93□□□□□ -0.98
HOXD3-203ENST00000432796 SLC38A2Q96QD8 506 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 EBF4Q9BQW3 602 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 KATNB1Q9BVA0 655 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 LINC00470Q9BZP3 86 aa8.93□□□□□ -0.98
HOXD3-203ENST00000432796 MYOZ1Q9NP98 299 aaPredicted RBP8.93□□□□□ -0.98
HOXD3-203ENST00000432796 HEATR1Q9H583 2144 aaKnown RBP8.92□□□□□ -0.98
HOXD3-203ENST00000432796 A0A1B0GWA3 101 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 LRP5LA4QPB2 252 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 LGI1O95970 557 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 IFNA14P01570 189 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 HIST1H2ABP04908 130 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 PRG2P13727 222 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 AHCYP23526 432 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 EDNRAP25101 427 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 SELENOPP49908 381 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 DVL1P1P54792 670 aaPredicted RBP8.92□□□□□ -0.98
HOXD3-203ENST00000432796 HOXC5Q00444 222 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 ROR2Q01974 943 aaKnown RBP8.92□□□□□ -0.98
HOXD3-203ENST00000432796 PLAURQ03405 335 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 PMS2P3Q13401 168 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 CYLC2Q14093 348 aaPredicted RBP8.92□□□□□ -0.98
HOXD3-203ENST00000432796 HSP90B2PQ58FF3 399 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 TTMPQ5BVD1 217 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 HIST3H2AQ7L7L0 130 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 SLC46A3Q7Z3Q1 461 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 PATL1Q86TB9 770 aaKnown RBP8.92□□□□□ -0.98
HOXD3-203ENST00000432796 SCAIQ8N9R8 606 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 ADPRHL1Q8NDY3 354 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 OR4F15Q8NGB8 312 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 OR6S1Q8NH40 331 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 MAGEE2Q8TD90 523 aaPredicted RBP8.92□□□□□ -0.98
HOXD3-203ENST00000432796 TSPEARQ8WU66 669 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 CKAP2Q8WWK9 683 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 HPS1Q92902 700 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 HIST1H2ACQ93077 130 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 PKP2Q99959 881 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 NPHS2Q9NP85 383 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 MED29Q9NX70 200 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 VAPAQ9P0L0 249 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 USP22Q9UPT9 525 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 SPEF1Q9Y4P9 236 aa8.92□□□□□ -0.98
HOXD3-203ENST00000432796 ARPC4-TTLL3A0A0A6YYG9 625 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 ATP6V1G2-DDX39BF2Z307 99 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 M0R082 166 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 PDLIM1O00151 329 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 NPIPB7O75200 414 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 PDE5AO76074 875 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 MT-ATP6P00846 226 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 C1QCP02747 245 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 UMPSP11172 480 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 GPX2P18283 190 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 CD247P20963 164 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 APEX1P27695 318 aaKnown RBP8.91□□□□□ -0.98
HOXD3-203ENST00000432796 GRPRP30550 384 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 ARR3P36575 388 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 RBMXP38159 391 aaKnown RBP8.91□□□□□ -0.98
HOXD3-203ENST00000432796 CDH15P55291 814 aa8.91□□□□□ -0.98
HOXD3-203ENST00000432796 POU3F1Q03052 451 aaPredicted RBP8.91□□□□□ -0.98
HOXD3-203ENST00000432796 PUDPQ08623 228 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms